RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MAS1P04201 325 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 OCM2P0CE71 109 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 OCMP0CE72 109 aaPredicted RBP0.8□□□□□ -2.28
PRPF39-208ENST00000554785 CD40LGP29965 261 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 ANP32AP39687 249 aaKnown RBP0.8□□□□□ -2.28
PRPF39-208ENST00000554785 SERPINB9P50453 376 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 DYNLT3P51808 116 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 FXYD6P3P58550 94 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 GRB2P62993 217 aaKnown RBP0.8□□□□□ -2.28
PRPF39-208ENST00000554785 GNG3P63215 75 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 EMX2Q04743 252 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 MED21Q13503 144 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 LELP1Q5T871 98 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 FAM131AQ6UXB0 335 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 LINC00322Q6ZN03 302 aaPredicted RBP0.8□□□□□ -2.28
PRPF39-208ENST00000554785 MSRB3Q8IXL7 192 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 SLC7A5P1Q8MH63 180 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 ORMDL3Q8N138 153 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 LINC00469Q8N7U9 141 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 SLC25A29Q8N8R3 303 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 OR10K1Q8NGX5 313 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 OR2T10Q8NGZ9 312 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 OR10A6Q8NH74 314 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 NEK7Q8TDX7 302 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 THEM6Q8WUY1 208 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 TESCQ96BS2 214 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 MRPL48Q96GC5 212 aaKnown RBP0.8□□□□□ -2.28
PRPF39-208ENST00000554785 Q96MT0 163 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 BCL7BQ9BQE9 202 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF251Q9BRH9 671 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF426Q9BUY5 554 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 CHST5Q9GZS9 411 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 ARV1Q9H2C2 271 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 OR51I2Q9H344 312 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 GAL3ST2Q9H3Q3 398 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 CYB5R1Q9UHQ9 305 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 VAX2Q9UIW0 290 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 HHLA2Q9UM44 414 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 NOP16Q9Y3C1 178 aaKnown RBP0.8□□□□□ -2.28
PRPF39-208ENST00000554785 LINC00312Q9Y6C7 94 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 USH2AO75445 5202 aa0.8□□□□□ -2.28
PRPF39-208ENST00000554785 A0A087WUU8 490 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 IGHV3-21A0A0B4J1V1 117 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TRAV10A0A0B4J240 114 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TRAV8-4A0A0B4J246 113 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TRAV8-6A0A0B4J262 113 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ODAMA1E959 279 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 PRORSD1PA6NEY8 169 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 C2orf70A6NJV1 201 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TMEM210A6NLX4 147 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 H0YJX3 145 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF593O00488 134 aaPredicted RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 SDCBPO00560 298 aaPredicted RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CXCR6O00574 342 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MFNGO00587 321 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TGOLN2O43493 480 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RPP14O95059 124 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 NDUFB2O95178 105 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 FSTL3O95633 263 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 NRASP01111 189 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 IFNA5P01569 189 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 P01737 135 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CD14P08571 375 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RNASE2P10153 161 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 PPIBP23284 216 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 IL3RAP26951 378 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CRABP1P29762 137 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 PRSS3P35030 304 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MAGEA2P43356 314 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 NUDT2P50583 147 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 POLR2JP52435 117 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 FXYD7P58549 80 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 LSM6P62312 80 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ST3GAL4Q11206 333 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 FADDQ13158 208 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 BTN1A1Q13410 526 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CDK5R1Q15078 307 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ATP6V1FQ16864 119 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CEACAM21Q3KPI0 293 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CCDC153Q494R4 210 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 C10orf55Q5SWW7 151 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF660Q6AZW8 331 aaPredicted RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 THOC7Q6I9Y2 204 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DNM1P34Q6PK57 102 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DHRS4L2Q6PKH6 230 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 SPINT4Q6UDR6 99 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DRAM2Q6UX65 266 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 HEPN1Q6WQI6 88 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 NATD1Q8N6N6 113 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 OR10AC1Q8NH08 325 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 OR4K15Q8NH41 348 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ACOT12Q8WYK0 555 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 GTF2H4Q92759 462 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CEP19Q96LK0 163 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 OR52B2Q96RD2 323 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TBX5Q99593 518 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MRPL20Q9BYC9 149 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 OR51V1Q9H2C8 321 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 LINC00574Q9H8X3 128 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 GPR84Q9NQS5 396 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms