RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TNRC6BQ9UPQ9 1833 aaKnown RBP0.95□□□□□ -2.26
SCFD1-213ENST00000554776 TRGV10A0A0A0MS01 117 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 ODAMA1E959 279 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 MFSD11O43934 449 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 HYPMO75409 117 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 IFNA1P01562 189 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 PHBP35232 272 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 INSL3P51460 131 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 C1orf137Q5JT78 98 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 C22orf39Q6P5X5 142 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 TEX261Q6UWH6 196 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 LYG2Q86SG7 212 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 OR2T35Q8NGX2 323 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 OR13C6PQ8NH95 151 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 ZHX1-C8orf76Q96EF9 292 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 U3KQ87 197 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 EXPH5Q8NEV8 1989 aa0.95□□□□□ -2.26
SCFD1-213ENST00000554776 FBN3Q75N90 2809 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 MYH10P35580 1976 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 TRBV6-7A0A0A0MS04 114 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 B4DSR2 109 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 H7C1C5 153 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 GEMIN2O14893 280 aaKnown RBP0.94□□□□□ -2.26
SCFD1-213ENST00000554776 PIAS1O75925 651 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 CRHP06850 196 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 CXCL1P09341 107 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 DYNLT3P51808 116 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 LCN6P62502 163 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 CNBPP62633 177 aaKnown RBP0.94□□□□□ -2.26
SCFD1-213ENST00000554776 AKR1C8PQ5T2L2 129 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 TMED4Q7Z7H5 227 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 OBSCN-AS1Q96MR7 158 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 PBDC1Q9BVG4 233 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 NPCDR1Q9BY65 106 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 C14orf132Q9NPU4 83 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 SSR3Q9UNL2 185 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 UFC1Q9Y3C8 167 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 NUP210LQ5VU65 1888 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 SCN3AQ9NY46 2000 aa0.94□□□□□ -2.26
SCFD1-213ENST00000554776 CACNA1BQ00975 2339 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 A0A087WX48 190 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 DUXBA0A1W2PPF3 345 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 RIIAD1A6NNX1 92 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 K7ERJ3 54 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 CD2P06729 351 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 NEFHP12036 1026 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 TMBIM6P55061 237 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 PLCXD2Q0VAA5 305 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 MSMO1Q15800 293 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 OR10K1Q8NGX5 313 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 TEX47Q8TBZ9 253 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 NEK7Q8TDX7 302 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 YPEL2Q96QA6 119 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 LYSMD1Q96S90 227 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 OR2J1Q9GZK6 312 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 CDC42SE1Q9NRR8 79 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 LYRM2Q9NU23 88 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-213ENST00000554776 C22orf24Q9Y442 160 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 EIF3AQ14152 1382 aaKnown RBP0.93□□□□□ -2.26
SCFD1-213ENST00000554776 DLG5Q8TDM6 1919 aa0.93□□□□□ -2.26
SCFD1-213ENST00000554776 MYO5AQ9Y4I1 1855 aaKnown RBP0.92□□□□□ -2.26
SCFD1-213ENST00000554776 IGKV2D-26A0A0A0MRZ7 120 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 ZNF736B4DX44 427 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-213ENST00000554776 GGCTO75223 188 aaKnown RBP0.92□□□□□ -2.26
SCFD1-213ENST00000554776 DNAL4O96015 105 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 CSN2P05814 226 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 IL9P15248 144 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 GLRXP35754 106 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 CRYBA4P53673 196 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 ARPP19P56211 112 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 POU6F1Q14863 301 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 SPRNQ5BIV9 151 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 EIF5AL1Q6IS14 154 aaKnown RBP0.92□□□□□ -2.26
SCFD1-213ENST00000554776 TMEM254Q8TBM7 123 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 CANT1Q8WVQ1 401 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 ODF3Q96PU9 254 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 PRRT1Q99946 306 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 RASL12Q9NYN1 266 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 TAS2R7Q9NYW3 318 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 ZFP30Q9Y2G7 519 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 ARHGEF11O15085 1522 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 CEP164Q9UPV0 1460 aa0.92□□□□□ -2.26
SCFD1-213ENST00000554776 TECTAO75443 2155 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 KMT2BQ9UMN6 2715 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-213ENST00000554776 N4BP2Q86UW6 1770 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-213ENST00000554776 TCRBV4S1A1TA0A5B7 111 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 TLCD2A6NGC4 264 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 A8MWV9 139 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 AIPO00170 330 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 TRGC2P03986 189 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 HLA-EP13747 358 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 ZNF25P17030 456 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-213ENST00000554776 ROMO1P60602 79 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 IFT20Q8IY31 132 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 Q8N814 137 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 ST6GALNAC3Q8NDV1 305 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 OR5D14Q8NGL3 314 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 OR4K15Q8NH41 348 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 ZC2HC1AQ96GY0 325 aa0.91□□□□□ -2.26
SCFD1-213ENST00000554776 GPX7Q96SL4 187 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms