RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SLC16A13Q7RTY0 426 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 DEFB125Q8N687 156 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 OR2K2Q8NGT1 345 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 CCDC140Q96MF4 163 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 NPCDR1Q9BY65 106 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 PEMTQ9UBM1 199 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 BIRC6Q9NR09 4857 aa7.95□□□□□ -1.14
SHMT2-215ENST00000554656 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 TRAV1-1A0A0B4J248 108 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 SMCO3A2RU48 225 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 C2orf70A6NJV1 201 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 TEX46H3BTG2 121 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 IGHV3-23P01764 117 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 HBE1P02100 147 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 AREGP15514 252 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 RPL29P47914 159 aaKnown RBP7.94□□□□□ -1.14
SHMT2-215ENST00000554656 AKR1C1Q04828 323 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 C15orf32Q32M92 178 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 TMEM41BQ5BJD5 291 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 COMMD7Q86VX2 200 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 NECAP1Q8NC96 275 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 CXorf58Q96LI9 332 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 FANCD2OSQ96PS1 177 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 RSG1Q9BU20 258 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 S4R3C0 116 aa7.94□□□□□ -1.14
SHMT2-215ENST00000554656 NDUFB8O95169 186 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 FOLR2P14207 255 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 HIST1H1BP16401 226 aaKnown RBP7.93□□□□□ -1.14
SHMT2-215ENST00000554656 RAB2AP61019 212 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 SELENOTP62341 195 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 GAMTQ14353 236 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 ACOT6Q3I5F7 207 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-215ENST00000554656 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 THAP8Q8NA92 274 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 TMEM116Q8NCL8 245 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 FAM213BQ8TBF2 198 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 DYNLRB2Q8TF09 96 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 PCNPQ8WW12 178 aaKnown RBP7.93□□□□□ -1.14
SHMT2-215ENST00000554656 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 MARC2Q969Z3 335 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 SRD5A3Q9H8P0 318 aa7.93□□□□□ -1.14
SHMT2-215ENST00000554656 TMEM213A2RRL7 107 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 MFSD2BA6NFX1 497 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 OR11H12B2RN74 326 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 LGALS9O00182 355 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 AGPAT2O15120 278 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 OR2C1O95371 312 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 M6PRP20645 277 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 MFAP2P55001 183 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 PMS2P11Q13670 270 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 FFAR4Q5NUL3 377 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 MGST2Q99735 147 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 FNDC4Q9H6D8 234 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-215ENST00000554656 RPRMQ9NS64 109 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 THYN1Q9P016 225 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 FBXL7Q9UJT9 491 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 SLC45A2Q9UMX9 530 aa7.92□□□□□ -1.14
SHMT2-215ENST00000554656 IGLV11-55A0A075B6I3 123 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 CTXND1A0A1B0GTU2 59 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 I3L2K1 104 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 GGCTO75223 188 aaKnown RBP7.91□□□□□ -1.14
SHMT2-215ENST00000554656 REG1AP05451 166 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 H2AFB1P0C5Y9 115 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 DEFA4P12838 97 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 FCGR2BP31994 310 aaPredicted RBP7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PRR20EP86478 221 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PRR20CP86479 221 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PRR20DP86480 221 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PRR20BP86481 221 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PRR20AP86496 221 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 GUCA2BQ16661 112 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 CLEC19AQ6UXS0 136 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 TMEM61Q8N0U2 210 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 ATP6V0BQ99437 205 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 TRGV9Q99603 122 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
SHMT2-215ENST00000554656 SMDT1Q9H4I9 107 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 MLXQ9UH92 298 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PXMP4Q9Y6I8 212 aa7.91□□□□□ -1.14
SHMT2-215ENST00000554656 PLECQ15149 4684 aaKnown RBP7.9□□□□□ -1.14
SHMT2-215ENST00000554656 A8MWP6 167 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 NDUFS6O75380 124 aaKnown RBP7.9□□□□□ -1.14
SHMT2-215ENST00000554656 MT-CO2P00403 227 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 CBLN1P23435 193 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 ARL3P36405 182 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 B2MP61769 119 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 GPHB5Q86YW7 130 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 RPP25LQ8N5L8 163 aaKnown RBP7.9□□□□□ -1.14
SHMT2-215ENST00000554656 OR10G4Q8NGN3 311 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 OR10G9Q8NGN4 311 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 OR10G7Q8NGN6 311 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 OR4X1Q8NH49 305 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 MISP3Q96FF7 219 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 RNF2Q99496 336 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 HRH4Q9H3N8 390 aa7.9□□□□□ -1.14
SHMT2-215ENST00000554656 TECRQ9NZ01 308 aaKnown RBP7.9□□□□□ -1.14
SHMT2-215ENST00000554656 RFNGQ9Y644 331 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms