RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DEFA3P59666 94 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 SNRPD3P62318 126 aaKnown RBP7.85□□□□□ -1.15
SHMT2-213ENST00000554600 IFITM3Q01628 133 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 ACTL10Q5JWF8 245 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 OR8I2Q8N0Y5 310 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 SLC25A22Q9H936 323 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 MGAT4CQ9UBM8 478 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 FBXL17Q9UF56 701 aa7.85□□□□□ -1.15
SHMT2-213ENST00000554600 SACSQ9NZJ4 4579 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 TSC22D2O75157 780 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 IL5P05113 134 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 PAX9P55771 341 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 S100A10P60903 97 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 DLK1P80370 383 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 GSG1LQ6UXU4 331 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 TMEM144Q7Z5S9 345 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 OR10P1Q8NGE3 313 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 OR1B1Q8NGR6 318 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 TMEM147Q9BVK8 224 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 GPN1Q9HCN4 374 aaPredicted RBP7.84□□□□□ -1.15
SHMT2-213ENST00000554600 DOK5Q9P104 306 aa7.84□□□□□ -1.15
SHMT2-213ENST00000554600 C7orf66A4D0T2 115 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 PVALBP20472 110 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-213ENST00000554600 S100A7P31151 101 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 ID1P41134 155 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 CAV2P51636 162 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 TAS2R30P59541 319 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 PMS2P11Q13670 270 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 TMEM14EPQ6UXP3 125 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 CYP2G1PQ6ZSU1 146 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 NRARPQ7Z6K4 114 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 GATAD1Q8WUU5 269 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 C2orf50Q96LR7 162 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 LINC00052Q96N35 136 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 RARRES2Q99969 163 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 DNAH1Q9P2D7 4330 aa7.83□□□□□ -1.16
SHMT2-213ENST00000554600 RYR2Q92736 4967 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 CXorf65A6NEN9 183 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 PMS2P5A8MQ11 134 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 K7EPK0 472 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 OR5G3P0C626 314 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 GALR1P47211 349 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 RAP2BP61225 183 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 C1orf194Q5T5A4 169 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 TMEM182Q6ZP80 229 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-213ENST00000554600 TRPT1Q86TN4 253 aaKnown RBP7.82□□□□□ -1.16
SHMT2-213ENST00000554600 TMEM217Q8N7C4 229 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 OR11H2Q8NH07 326 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 NPVFQ9HCQ7 196 aa7.82□□□□□ -1.16
SHMT2-213ENST00000554600 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 ZNF98A6NK75 572 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 INMT-MINDY4F8WBC2 141 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 GOSR2O14653 212 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 PRAF2O60831 178 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 HYPMO75409 117 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 LINC00869P0C866 280 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 SPP1P10451 314 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 SELENOTP62341 195 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 SLC38A11Q08AI6 406 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 MORN3Q6PF18 240 aaPredicted RBP7.81□□□□□ -1.16
SHMT2-213ENST00000554600 TEPPQ6URK8 271 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 RSG1Q9BU20 258 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 SLC25A32Q9H2D1 315 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 SLC45A2Q9UMX9 530 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 HIGD1AQ9Y241 93 aa7.81□□□□□ -1.16
SHMT2-213ENST00000554600 FAM24AA6NFZ4 105 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 FNDC10F2Z333 226 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 CST7O76096 145 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 IGKV3-20P01619 116 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 ATF4P18848 351 aaPredicted RBP7.8□□□□□ -1.16
SHMT2-213ENST00000554600 PSMB3P49720 205 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 DEFB1P60022 68 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 EWSR1Q01844 656 aaKnown RBP eCLIP7.8□□□□□ -1.16
SHMT2-213ENST00000554600 FGL1Q08830 312 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 ARL16Q0P5N6 197 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 RAB32Q13637 225 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 MARVELD1Q9BSK0 173 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 SCRT1Q9BWW7 348 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 ARL6Q9H0F7 186 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 SEPSECSQ9HD40 501 aaKnown RBP7.8□□□□□ -1.16
SHMT2-213ENST00000554600 CLEC5AQ9NY25 188 aa7.8□□□□□ -1.16
SHMT2-213ENST00000554600 ISLRO14498 428 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 AGPAT2O15120 278 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 DEFB4AO15263 64 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 DEDDO75618 318 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 SIX6O95475 246 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 C4BPBP20851 252 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 MEOX2P50222 304 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 NUTF2P61970 127 aaKnown RBP7.79□□□□□ -1.16
SHMT2-213ENST00000554600 TMEM41BQ5BJD5 291 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 S100A7AQ86SG5 101 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 ZNF546Q86UE3 836 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 STX12Q86Y82 276 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 OR4B1Q8NGF8 309 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 GPR82Q96P67 336 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 UHRF2Q96PU4 802 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 GGACTQ9BVM4 153 aa7.79□□□□□ -1.16
SHMT2-213ENST00000554600 SLC25A39Q9BZJ4 359 aaPredicted RBP7.79□□□□□ -1.16
SHMT2-213ENST00000554600 XCL2Q9UBD3 114 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms