RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CIB3Q96Q77 187 aaPredicted RBP13.48□□□□□ -0.25
CPSF2-203ENST00000554290 NDUFAF3Q9BU61 184 aa13.48□□□□□ -0.25
CPSF2-203ENST00000554290 IGHV3OR16-12A0A075B7B8 117 aa13.47□□□□□ -0.25
CPSF2-203ENST00000554290 ISLRO14498 428 aa13.47□□□□□ -0.25
CPSF2-203ENST00000554290 GGNBP1Q5YKI7 109 aa13.47□□□□□ -0.25
CPSF2-203ENST00000554290 EBLN2Q6P2I7 272 aa13.47□□□□□ -0.25
CPSF2-203ENST00000554290 OR4B1Q8NGF8 309 aa13.47□□□□□ -0.25
CPSF2-203ENST00000554290 SLC25A21Q9BQT8 299 aaPredicted RBP13.47□□□□□ -0.25
CPSF2-203ENST00000554290 TMED3Q9Y3Q3 217 aa13.47□□□□□ -0.25
CPSF2-203ENST00000554290 SOCS3O14543 225 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 P0DMU3 169 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 FAM231AP0DMU4 169 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 FAM231CP0DMU5 169 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 MEOX2P50222 304 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 FXYD7P58549 80 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 DEFB1P60022 68 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 DEDD2Q8WXF8 326 aa13.46□□□□□ -0.25
CPSF2-203ENST00000554290 KMT2AQ03164 3969 aa13.46□□□□□ -0.26
CPSF2-203ENST00000554290 SYNGR2O43760 224 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 EMP1P54849 157 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 ZNF79Q15937 498 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 THAP8Q8NA92 274 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 RPRMQ9NS64 109 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 SLC45A2Q9UMX9 530 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 RFNGQ9Y644 331 aa13.45□□□□□ -0.26
CPSF2-203ENST00000554290 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 TEX48A0A1B0GUV7 120 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 S100A7P31151 101 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 GALR1P47211 349 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 PAX9P55771 341 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 PSG9Q00887 426 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 LINC00336Q6ZUF6 198 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 MAGT1Q9H0U3 335 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 GOLT1BQ9Y3E0 138 aa13.44□□□□□ -0.26
CPSF2-203ENST00000554290 WRBO00258 174 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 SFT2D2O95562 160 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 S100A5P33763 92 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 FAM78BQ5VT40 261 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 BPIFCQ8NFQ6 507 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 C16orf92Q96LL3 132 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 SLC35B3Q9H1N7 401 aa13.43□□□□□ -0.26
CPSF2-203ENST00000554290 FRAS1Q86XX4 4008 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 A0A0J9YX75 114 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 PPP1R1AQ13522 171 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 FAM210BQ96KR6 192 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 GPR82Q96P67 336 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 C7orf50Q9BRJ6 194 aaKnown RBP13.42□□□□□ -0.26
CPSF2-203ENST00000554290 SLC25A22Q9H936 323 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 V9GYH0 126 aa13.42□□□□□ -0.26
CPSF2-203ENST00000554290 ZNF98A6NK75 572 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 F6UB75 175 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 HBE1P02100 147 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 HOXB5P09067 269 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 AKR1C1Q04828 323 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 SPANXN5Q5MJ07 72 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 OR4D5Q8NGN0 318 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 OR1B1Q8NGR6 318 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 NIPSNAP3BQ9BS92 247 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 SCRT1Q9BWW7 348 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 SLC25A32Q9H2D1 315 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 DKK2Q9UBU2 259 aa13.41□□□□□ -0.26
CPSF2-203ENST00000554290 STRAPQ9Y3F4 350 aaKnown RBP13.41□□□□□ -0.26
CPSF2-203ENST00000554290 PRSS46E5RG02 174 aa13.4□□□□□ -0.26
CPSF2-203ENST00000554290 ORM2P19652 201 aa13.4□□□□□ -0.26
CPSF2-203ENST00000554290 FAM222AQ5U5X8 452 aa13.4□□□□□ -0.26
CPSF2-203ENST00000554290 TMEM147Q9BVK8 224 aa13.4□□□□□ -0.26
CPSF2-203ENST00000554290 DOK5Q9P104 306 aa13.4□□□□□ -0.26
CPSF2-203ENST00000554290 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
CPSF2-203ENST00000554290 IFNA21P01568 189 aa13.39□□□□□ -0.27
CPSF2-203ENST00000554290 UBE2MP61081 183 aaKnown RBP13.39□□□□□ -0.27
CPSF2-203ENST00000554290 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
CPSF2-203ENST00000554290 GSG1LQ6UXU4 331 aa13.39□□□□□ -0.27
CPSF2-203ENST00000554290 C1orf158Q8N1D5 194 aa13.39□□□□□ -0.27
CPSF2-203ENST00000554290 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
CPSF2-203ENST00000554290 GATA2P23769 480 aaPredicted RBP13.38□□□□□ -0.27
CPSF2-203ENST00000554290 OXA1LQ15070 435 aa13.38□□□□□ -0.27
CPSF2-203ENST00000554290 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
CPSF2-203ENST00000554290 TMEM208Q9BTX3 173 aa13.38□□□□□ -0.27
CPSF2-203ENST00000554290 VPS13DQ5THJ4 4388 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 A8MTW9 85 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 H3BP45 60 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 ACOT7LQ6ZUV0 252 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 TMEM144Q7Z5S9 345 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 CCDC190Q86UF4 302 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 IGF2BP2-AS1Q96M15 143 aa13.37□□□□□ -0.27
CPSF2-203ENST00000554290 YTHDF2Q9Y5A9 579 aaKnown RBP13.37□□□□□ -0.27
CPSF2-203ENST00000554290 SMCO3A2RU48 225 aa13.36□□□□□ -0.27
CPSF2-203ENST00000554290 DUSP14O95147 198 aaKnown RBP13.36□□□□□ -0.27
CPSF2-203ENST00000554290 HTN3P15516 51 aa13.36□□□□□ -0.27
CPSF2-203ENST00000554290 INPP1P49441 399 aa13.36□□□□□ -0.27
CPSF2-203ENST00000554290 ID3Q02535 119 aa13.36□□□□□ -0.27
CPSF2-203ENST00000554290 SPANXN2Q5MJ10 180 aa13.36□□□□□ -0.27
CPSF2-203ENST00000554290 TMEM182Q6ZP80 229 aaPredicted RBP13.36□□□□□ -0.27
CPSF2-203ENST00000554290 UBE2DNLQ8IWF7 75 aa13.36□□□□□ -0.27
CPSF2-203ENST00000554290 DNAH10Q8IVF4 4471 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms