RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 LINC01587Q99440 93 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 AGMATQ9BSE5 352 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 CSTL1Q9H114 145 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 MRPS18AQ9NVS2 196 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 COMMD9Q9P000 198 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 HSPB7Q9UBY9 170 aa1.92□□□□□ -2.1
PRPF39-205ENST00000554081 RSL24D1Q9UHA3 163 aaKnown RBP1.92□□□□□ -2.1
PRPF39-205ENST00000554081 LOC102724200A0A096LPH7 203 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 FAM90A10PA6NDY2 464 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 C2orf70A6NJV1 201 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 UPK2O00526 184 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RLN2P04090 185 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 SULT1A3P0DMM9 295 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 SULT1A4P0DMN0 295 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 OR10J1P30954 320 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 NKX2-1P43699 371 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 NUTF2P61970 127 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 WT1-ASQ06250 92 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 SLC38A11Q08AI6 406 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 KIAA0141Q14154 515 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 HAGHQ16775 308 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 KRTAP21-3Q3LHN1 58 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 HOGA1Q86XE5 327 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZFP82Q8N141 532 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TEX45Q8NA69 505 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 OR4X1Q8NH49 305 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RAB2BQ8WUD1 216 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 C4orf3Q8WVX3 66 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RNF183Q96D59 192 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TMEM147Q9BVK8 224 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 MRPS26Q9BYN8 205 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 DAZ1Q9NQZ3 744 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 FKBP11Q9NYL4 201 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 LSM2Q9Y333 95 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TMED3Q9Y3Q3 217 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 CSDC2Q9Y534 153 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ETV7Q9Y603 341 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TRGV2A0A075B6R0 118 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 K7EP13 123 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 M0R2Z0 102 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 AGPAT2O15120 278 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ARPC5O15511 151 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TGOLN2O43493 480 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 COX7A2P2O60397 106 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 HLA-DQB1P01920 261 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 APOHP02749 345 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 H2AFB1P0C5Y9 115 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 OR10J4P0C629 311 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 PVALBP20472 110 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 PSMB8P28062 276 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 CD34P28906 385 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 SLC6A1P30531 599 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 FGF8P55075 233 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 GABARAPL2P60520 117 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 HERV-K104P63124 156 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 IFITM2Q01629 132 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF90Q03938 601 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 FHL3Q13643 280 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RBMS2Q15434 407 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 SPINK13Q1W4C9 94 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 C6orf226Q5I0X4 101 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 MUC21Q5SSG8 566 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RNASEKQ6P5S7 137 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 FAM159AQ6UWV7 190 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF66Q6ZN08 573 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 Q6ZRG5 221 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF833PQ6ZTB9 187 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ODF3L1Q8IXM7 274 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 WIPF2Q8TF74 440 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RBPMSQ93062 196 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 USMG5Q96IX5 58 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TM2D1Q9BX74 207 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 PSENENQ9NZ42 101 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RCC2Q9P258 522 aaKnown RBP1.91□□□□□ -2.1
PRPF39-205ENST00000554081 UFC1Q9Y3C8 167 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 FXYD6-FXYD2A0A087WZ82 144 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 A0A1B0GU03 582 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 UBE2L5PA0A1B0GUS4 154 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 A0A1B0GV72 72 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 A0A1W2PS18 150 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 PRSS29PA6NIE9 313 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 C9JCJ5 164 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 CTDSPLO15194 276 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 IFNA5P01569 189 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 S100A8P05109 93 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 CGB3P0DN86 165 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 CGB7P0DN87 165 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RAB6AP20340 208 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 P2RY1P47900 373 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF45Q02386 682 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF415Q09FC8 603 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ASAH1Q13510 395 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 RAB31Q13636 194 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 CNPY1Q3B7I2 92 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 DNLZQ5SXM8 178 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 TOMM20LQ6UXN7 152 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ERASQ7Z444 233 aa1.91□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF546Q86UE3 836 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms