RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 MLXQ9UH92 298 aa13.65□□□□□ -0.22
PSEN1-208ENST00000553719 RFNGQ9Y644 331 aa13.65□□□□□ -0.22
PSEN1-208ENST00000553719 NBEAL1Q6ZS30 2694 aa13.65□□□□□ -0.22
PSEN1-208ENST00000553719 BORCS7-ASMTA0A0B4J1R7 106 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 C17orf112F2Z3M2 114 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 CHEK1O14757 476 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 SAP30O75446 220 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
PSEN1-208ENST00000553719 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
PSEN1-208ENST00000553719 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 TMEM37Q8WXS4 190 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
PSEN1-208ENST00000553719 RABAC1Q9UI14 185 aa13.64□□□□□ -0.23
PSEN1-208ENST00000553719 KANTRA0A1W2PQU2 76 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 BUB3O43684 328 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 ORM2P19652 201 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 NPPCP23582 126 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 INSL3P51460 131 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 C9orf66Q5T8R8 295 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 ZNF709Q8N972 641 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 OR1B1Q8NGR6 318 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 ST8SIA2Q92186 375 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 SH3BGRL3Q9H299 93 aa13.63□□□□□ -0.23
PSEN1-208ENST00000553719 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 H3BRN7 92 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 HYPMO75409 117 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 DEFB114Q30KQ6 69 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 GCSAMLQ5JQS6 135 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 Q6ZRG5 221 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 TECRQ9NZ01 308 aaKnown RBP13.62□□□□□ -0.23
PSEN1-208ENST00000553719 DOK5Q9P104 306 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 HIGD1AQ9Y241 93 aa13.62□□□□□ -0.23
PSEN1-208ENST00000553719 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 ELOA3CA0A087WX78 387 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-208ENST00000553719 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 BOLA2-SMG1P6H3BVE0 249 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 C16orf54Q6UWD8 224 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 GLMPQ8WWB7 406 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 GNPNAT1Q96EK6 184 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-208ENST00000553719 UHRF2Q96PU4 802 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 RNF2Q99496 336 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 SHANK2-AS3Q9BTD1 123 aa13.61□□□□□ -0.23
PSEN1-208ENST00000553719 ZNF471Q9BX82 626 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-208ENST00000553719 SLC25A39Q9BZJ4 359 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-208ENST00000553719 SPP1P10451 314 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 OR2K2Q8NGT1 345 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 PFDN5Q99471 154 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 SCRT1Q9BWW7 348 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 DNAJC4Q9NNZ3 241 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 NOTCH1P46531 2555 aa13.6□□□□□ -0.23
PSEN1-208ENST00000553719 IGHV3-66A0A0C4DH42 116 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 A0A1W2PS18 150 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 COX7A2P2O60397 106 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 OR5G3P0C626 314 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 SERF2P84101 59 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 CD300EQ496F6 205 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-208ENST00000553719 OXLD1Q5BKU9 147 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 C10orf113Q5VZT2 155 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 OR1L4Q8NGR5 311 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 GPR61Q9BZJ8 451 aa13.59□□□□□ -0.23
PSEN1-208ENST00000553719 BMI1P35226 326 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 EGFEM1PQ0D2K5 195 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 LINC00305Q7Z4B0 112 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 BAP18Q8IXM2 172 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 TMEM61Q8N0U2 210 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 SLC25A32Q9H2D1 315 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 TMEM231Q9H6L2 316 aa13.58□□□□□ -0.24
PSEN1-208ENST00000553719 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 G3V4G9 280 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 MRPS12O15235 138 aaKnown RBP13.57□□□□□ -0.24
PSEN1-208ENST00000553719 RAB2AP61019 212 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 SLC51BQ86UW2 128 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 GRAMD2BQ96HH9 432 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 NARS2Q96I59 477 aaKnown RBP13.57□□□□□ -0.24
PSEN1-208ENST00000553719 C17orf77Q96MU5 243 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 SEPSECSQ9HD40 501 aaKnown RBP13.57□□□□□ -0.24
PSEN1-208ENST00000553719 PLA2G2EQ9NZK7 142 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 PFDN2Q9UHV9 154 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 SELENOKQ9Y6D0 94 aa13.57□□□□□ -0.24
PSEN1-208ENST00000553719 TRAV25A0A0B4J276 109 aa13.56□□□□□ -0.24
PSEN1-208ENST00000553719 TSPAN4O14817 238 aa13.56□□□□□ -0.24
PSEN1-208ENST00000553719 SEC11BP0C7V7 166 aa13.56□□□□□ -0.24
PSEN1-208ENST00000553719 TPT1P13693 172 aaKnown RBP13.56□□□□□ -0.24
PSEN1-208ENST00000553719 M6PRP20645 277 aa13.56□□□□□ -0.24
PSEN1-208ENST00000553719 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
PSEN1-208ENST00000553719 KPRPQ5T749 579 aaPredicted RBP13.56□□□□□ -0.24
PSEN1-208ENST00000553719 SPATA31B1PQ5VZV4 182 aa13.56□□□□□ -0.24
PSEN1-208ENST00000553719 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms