RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 GZMBP10144 247 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 ZNF418Q8TF45 676 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 ANAPC10Q9UM13 185 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 H3BRM9 83 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 DPM2O94777 84 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 APOMO95445 188 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 PAX8Q06710 450 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 TPTE2P1Q5T6R2 138 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 ACACAQ13085 2346 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 LY6DQ14210 128 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 NPFFR1Q9GZQ6 430 aa12.55□□□□□ -0.4
ARHGEF40-202ENST00000553709 TMEM262E9PQX1 116 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 DNAL4O96015 105 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 FAM90A2PQ658T7 463 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 LRRK1Q38SD2 2015 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 WISP1O95388 367 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 SPSB3Q6PJ21 355 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 NDUFS8O00217 210 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 RNASE1P07998 156 aaKnown RBP12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
ARHGEF40-202ENST00000553709 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 OR13C6PQ8NH95 151 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 RIF1Q5UIP0 2472 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 IGKV2-40A0A087WW87 121 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 A0A0G2JNJ9 132 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 IGKV2D-40P01614 121 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 WNT2P09544 360 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 C15orf32Q32M92 178 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 TMEM256Q8N2U0 113 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 Q9UFV3 132 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 PRB4P10163 310 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 EVI2AP22794 236 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 SIGLEC15Q6ZMC9 328 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 PRSS22Q9GZN4 317 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 JKAMPQ9P055 326 aa12.53□□□□□ -0.4
ARHGEF40-202ENST00000553709 OVOL1O14753 267 aa12.52□□□□□ -0.4
ARHGEF40-202ENST00000553709 VMO1Q7Z5L0 202 aa12.52□□□□□ -0.4
ARHGEF40-202ENST00000553709 CYSLTR1Q9Y271 337 aa12.52□□□□□ -0.4
ARHGEF40-202ENST00000553709 TRAV41A0A0B4J266 112 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 TRAV40A0A0B4J280 105 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 OOSP1A8MZH6 123 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 RPL15P61313 204 aaKnown RBP12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 PYY3Q5JQD4 70 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 ZNF524Q96C55 264 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 KLRD1Q13241 179 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 LDLRAD2Q5SZI1 272 aa12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 NHP2Q9NX24 153 aaKnown RBP12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 ZNF474Q6S9Z5 364 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF40-202ENST00000553709 C9JQL5 133 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 FNDC10F2Z333 226 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 RNASE2P10153 161 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 LINC00527Q9UJ94 153 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 ZNF106Q9H2Y7 1883 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 EMP1P54849 157 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 SRSF6Q13247 344 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 C1orf194Q5T5A4 169 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 VCX2Q9H322 139 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 POLEQ07864 2286 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 GPR179Q6PRD1 2367 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 SIGLEC9Q9Y336 463 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 TYMSP04818 313 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 Q6ZS92 163 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
ARHGEF40-202ENST00000553709 IGKCP01834 107 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 VDAC2P45880 294 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 C5orf64Q2M2E5 130 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 EFNA4P52798 201 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 ORAOV1Q8WV07 137 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 MS4A6AQ9H2W1 248 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 IGKV1-16P04430 117 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
ARHGEF40-202ENST00000553709 ITGB1BP1O14713 200 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 D6R8Y8 96 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 FER1L5A0AVI2 2057 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 LYZL1Q6UWQ5 148 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 UNQ6494/PRO21346Q6UXR6 183 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 A6NNC1 897 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 PRR31Q5SQ13 230 aa12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 CHTOPQ9Y3Y2 248 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-202ENST00000553709 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 M0R1W7 72 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 LMO1P25800 156 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 FNDC4Q9H6D8 234 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms