RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM116Q8NCL8 245 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 ABHD5Q8WTS1 349 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 MOB4Q9Y3A3 225 aa12.44□□□□□ -0.42
ACTN1-209ENST00000553659 ELOA3CA0A087WX78 387 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-209ENST00000553659 CXorf65A6NEN9 183 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 C11orf94C9JXX5 98 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM11P17152 192 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 FXYD3Q14802 87 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 GCSAMLQ5JQS6 135 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 FAM78BQ5VT40 261 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 ZNF329Q86UD4 541 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 NPIPB3Q92617 1050 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 MISP3Q96FF7 219 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-209ENST00000553659 NAT8Q9UHE5 227 aa12.43□□□□□ -0.42
ACTN1-209ENST00000553659 IGKV1OR2-108A0A075B7D4 117 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 ZNF727A8MUV8 499 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
ACTN1-209ENST00000553659 PAGE4O60829 102 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 AREGP15514 252 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 CTRB1P17538 263 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 GCHFRP30047 84 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 MYCNOSP40205 109 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 CTRB2Q6GPI1 263 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM88Q6PEY1 159 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 CBLN2Q8IUK8 224 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 STXBP6Q8NFX7 210 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 TMPRSS5Q9H3S3 457 aa12.42□□□□□ -0.42
ACTN1-209ENST00000553659 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
ACTN1-209ENST00000553659 NUPL2O15504 423 aaKnown RBP12.41□□□□□ -0.42
ACTN1-209ENST00000553659 COX7A2P2O60397 106 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 SCGB2A1O75556 95 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 C8orf88P0DMB2 117 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 DEFA4P12838 97 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 RND2P52198 227 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 UHRF2Q96PU4 802 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 CTDSP1Q9GZU7 261 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 DNAJC4Q9NNZ3 241 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM242Q9NWH2 141 aa12.41□□□□□ -0.42
ACTN1-209ENST00000553659 REG1AP05451 166 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 SSBP2P81877 361 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 AKIRIN2Q53H80 203 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 C18orf65Q6ZTR6 163 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 C8orf86Q6ZUL3 223 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 S100A7AQ86SG5 101 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 C5orf56Q8N8D9 126 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 TMEM68Q96MH6 324 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 NOL4LQ96MY1 436 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-209ENST00000553659 SDF2L1Q9HCN8 221 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 SEPSECSQ9HD40 501 aaKnown RBP12.4□□□□□ -0.42
ACTN1-209ENST00000553659 THYN1Q9P016 225 aa12.4□□□□□ -0.42
ACTN1-209ENST00000553659 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 NCBP2LA6PVI3 153 aaKnown RBP12.39□□□□□ -0.43
ACTN1-209ENST00000553659 FCN1O00602 326 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 MT-ND4LP03901 98 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 NHLRC4P0CG21 123 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-209ENST00000553659 PLP1P60201 277 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 CST9LP1Q5W188 147 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 RASL11BQ9BPW5 248 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 DOK5Q9P104 306 aa12.39□□□□□ -0.43
ACTN1-209ENST00000553659 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 FOLR2P14207 255 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
ACTN1-209ENST00000553659 ATF4P18848 351 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-209ENST00000553659 MFAP2P55001 183 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 SLC35B1P78383 322 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 MLANAQ16655 118 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 RNF212Q495C1 297 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 MIR17HGQ75NE6 70 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 C20orf24Q9BUV8 137 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 PARLQ9H300 379 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
ACTN1-209ENST00000553659 A0A1W2PRE2 83 aa12.37□□□□□ -0.43
ACTN1-209ENST00000553659 I3L2K1 104 aa12.37□□□□□ -0.43
ACTN1-209ENST00000553659 IGHG2P01859 326 aa12.37□□□□□ -0.43
ACTN1-209ENST00000553659 CX3CL1P78423 397 aa12.37□□□□□ -0.43
ACTN1-209ENST00000553659 C11orf52Q96A22 123 aa12.37□□□□□ -0.43
ACTN1-209ENST00000553659 RPUSD4Q96CM3 377 aaKnown RBP12.37□□□□□ -0.43
ACTN1-209ENST00000553659 LINC00527Q9UJ94 153 aa12.37□□□□□ -0.43
ACTN1-209ENST00000553659 COLCA2A8K830 154 aa12.36□□□□□ -0.43
ACTN1-209ENST00000553659 OR7C2O60412 319 aa12.36□□□□□ -0.43
ACTN1-209ENST00000553659 EIF3GO75821 320 aaKnown RBP eCLIP12.36□□□□□ -0.43
ACTN1-209ENST00000553659 OR2C1O95371 312 aa12.36□□□□□ -0.43
ACTN1-209ENST00000553659 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
ACTN1-209ENST00000553659 TMEM37Q8WXS4 190 aa12.36□□□□□ -0.43
ACTN1-209ENST00000553659 U3KQK5 164 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms