RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TAC3Q9UHF0 121 aa2.47□□□□□ -2.01
TDP1-207ENST00000553617 CELA1Q9UNI1 258 aa2.47□□□□□ -2.01
TDP1-207ENST00000553617 MAPKBP1O60336 1514 aa2.47□□□□□ -2.01
TDP1-207ENST00000553617 ABCA10Q8WWZ4 1543 aa2.47□□□□□ -2.01
TDP1-207ENST00000553617 MYH6P13533 1939 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 CASZ1Q86V15 1759 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 COL16A1Q07092 1604 aaPredicted RBP2.46□□□□□ -2.02
TDP1-207ENST00000553617 CHD3Q12873 2000 aaKnown RBP2.46□□□□□ -2.02
TDP1-207ENST00000553617 COL27A1Q8IZC6 1860 aaPredicted RBP2.46□□□□□ -2.02
TDP1-207ENST00000553617 OR51F1A6NGY5 319 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 ZNF860A6NHJ4 632 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 G3V3Q6 166 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 TMEM256-PLSCR3K7ERE1 68 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 PDCD5O14737 125 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 LINC00032P0C843 101 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 PYYP10082 97 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
TDP1-207ENST00000553617 KRTAP10-5P60370 271 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 HBBP68871 147 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 DEFA5Q01523 94 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 DEFB116Q30KQ4 102 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 C9orf153Q5TBE3 101 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 Q6AWC8 147 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 Q6ZR03 302 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 AAED1Q7RTV5 226 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 PDPNQ86YL7 162 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 LINC00311Q8N616 119 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 BPIFB6Q8NFQ5 453 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 OR4B1Q8NGF8 309 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 FAM57AQ8TBR7 257 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 PLEKHF2Q9H8W4 249 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 SMCO4Q9NRQ5 59 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 ZNF222Q9UK12 451 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 MRPS16Q9Y3D3 137 aaKnown RBP2.46□□□□□ -2.02
TDP1-207ENST00000553617 AP4S1Q9Y587 144 aa2.46□□□□□ -2.02
TDP1-207ENST00000553617 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 KDM6AO15550 1401 aaPredicted RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 DAPK1P53355 1430 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 MYH7BA7E2Y1 1941 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 TRAV12-2A0A075B6T6 113 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 IGHV3-72A0A0B4J1Y9 119 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 TRBV27A0A0K0K1C4 114 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 COLCA2A8K830 154 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 H3BQ15 152 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 EDF1O60869 148 aaKnown RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 IGKV1-5P01602 117 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 SEC11BP0C7V7 166 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 HLA-DRB4P13762 266 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 SRP14P37108 136 aaKnown RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 ARPP19P56211 112 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 UBE2BP63146 152 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 CCL20P78556 96 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 AKR1C1Q04828 323 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 UBE2SQ16763 222 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 MPV17L2Q567V2 206 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 FAM78AQ5JUQ0 283 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 Q5W150 140 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 Q6ZUT4 128 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 SCXQ7RTU7 201 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 PHF5AQ7RTV0 110 aaKnown RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 ATOH7Q8N100 152 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 OR10P1Q8NGE3 313 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 OR4X2Q8NGF9 303 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 OR5D16Q8NGK9 328 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 OR5AK2Q8NH90 309 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 RBMXL1Q96E39 390 aaKnown RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 LINC00526Q96FQ7 95 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 SEC11CQ9BY50 192 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 FGF23Q9GZV9 251 aaPredicted RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 AGPAT4-IT1Q9H0P7 198 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 SND1-IT1Q9HBX3 110 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 ZNRD1Q9P1U0 126 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 CHCHD2Q9Y6H1 151 aaPredicted RBP2.45□□□□□ -2.02
TDP1-207ENST00000553617 HLA-DRB4X5D2U9 266 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 UBR2Q8IWV8 1755 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 CCDC88BA6NC98 1476 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 FANCAO15360 1455 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 KIF20BQ96Q89 1820 aa2.45□□□□□ -2.02
TDP1-207ENST00000553617 ADAMTS12P58397 1594 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 NRKQ7Z2Y5 1582 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 NUP210LQ5VU65 1888 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 IGKV6-21A0A0C4DH24 114 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 A0A0D9SEW6 157 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 C3orf85A0A1B0GTC6 90 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 A0A1W2PP18 115 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 TMEM223A0PJW6 202 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 C9JCJ5 164 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 TMEM262E9PQX1 116 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 BUB1B-PAK6H3BSN5 160 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 APOC4-APOC2K7ER74 178 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 UQCRQO14949 82 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 NDUFB2O95178 105 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 IGHV3-11P01762 117 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 APOC2P02655 101 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 APCSP02743 223 aa2.44□□□□□ -2.02
TDP1-207ENST00000553617 PRM2P04554 102 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms