RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GAMTQ14353 236 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 GLMPQ8WWB7 406 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
SRP54-203ENST00000553544 PAIP2BQ9ULR5 123 aaKnown RBP8.6□□□□□ -1.03
SRP54-203ENST00000553544 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 FAM25EA8MYX2 175 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 L7N2F9 121 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 DEFB4AO15263 64 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 BUB3O43684 328 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 SCGB1D2O95969 90 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 PTTG1O95997 202 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 CFDP00746 253 aaPredicted RBP8.59□□□□□ -1.03
SRP54-203ENST00000553544 IL4P05112 153 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 RD3LP0DJH9 198 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 IAPPP10997 89 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 PSG1P11464 419 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 EIF2B2P49770 351 aaKnown RBP8.59□□□□□ -1.03
SRP54-203ENST00000553544 TAS2R30P59541 319 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 VAMP2P63027 116 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 ID3Q02535 119 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 NRARPQ7Z6K4 114 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
SRP54-203ENST00000553544 OR4D5Q8NGN0 318 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 GSKIPQ9P0R6 139 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 RABAC1Q9UI14 185 aa8.59□□□□□ -1.03
SRP54-203ENST00000553544 PRSS46E5RG02 174 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 SSSCA1O60232 199 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 TSC22D2O75157 780 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 AP2S1P53680 142 aaPredicted RBP8.58□□□□□ -1.04
SRP54-203ENST00000553544 CYCSP99999 105 aaKnown RBP8.58□□□□□ -1.04
SRP54-203ENST00000553544 SPANXN5Q5MJ07 72 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 LEMD1Q68G75 181 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 STXBP6Q8NFX7 210 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 OR51G1Q8NGK1 321 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 SEC22CQ9BRL7 303 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 MARVELD1Q9BSK0 173 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 HRH4Q9H3N8 390 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 PSENENQ9NZ42 101 aa8.58□□□□□ -1.04
SRP54-203ENST00000553544 IGKV1OR2-108A0A075B7D4 117 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 HELTA6NFD8 242 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 ZFP92A6NM28 416 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 POLR2GP62487 172 aaKnown RBP eCLIP8.57□□□□□ -1.04
SRP54-203ENST00000553544 ZNF90Q03938 601 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 S100A7AQ86SG5 101 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
SRP54-203ENST00000553544 RNF125Q96EQ8 232 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 SMIM8Q96KF7 97 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 MAGT1Q9H0U3 335 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
SRP54-203ENST00000553544 FNDC10F2Z333 226 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
SRP54-203ENST00000553544 GIG44P09565 113 aaPredicted RBP8.56□□□□□ -1.04
SRP54-203ENST00000553544 ZNF688P0C7X2 276 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 PET100P0DJ07 73 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 IFITM3Q01628 133 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 AKR1C1Q04828 323 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 OR8G2PQ6IF36 304 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 THAP8Q8NA92 274 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 OR10P1Q8NGE3 313 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 TRGV9Q99603 122 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 KRTAP4-5Q9BYR2 181 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 SEPSECSQ9HD40 501 aaKnown RBP8.56□□□□□ -1.04
SRP54-203ENST00000553544 MGAT4CQ9UBM8 478 aa8.56□□□□□ -1.04
SRP54-203ENST00000553544 IGHV4-4A0A075B6R2 117 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 TRAV10A0A0B4J240 114 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 RTL8CO15255 209 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 SSNA1O43805 119 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 RLN2P04090 185 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 HLA-DMBP28068 263 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 STX12Q86Y82 276 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 STHQ8IWL8 128 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 POM121L12Q8N7R1 296 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 GGACTQ9BVM4 153 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 NRN1Q9NPD7 142 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 RNF24Q9Y225 148 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
SRP54-203ENST00000553544 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 KNCNA6PVL3 124 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 H3BP45 60 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 M0R2N4 97 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 CCSO14618 274 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 P0DMU3 169 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 FAM231AP0DMU4 169 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 FAM231CP0DMU5 169 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 BCAP31P51572 246 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 S100A10P60903 97 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 SIGLEC15Q6ZMC9 328 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 RNF126Q9BV68 326 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 NMES1Q9C002 83 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 LSM5Q9Y4Y9 91 aaKnown RBP8.54□□□□□ -1.04
SRP54-203ENST00000553544 DNAH2Q9P225 4427 aa8.54□□□□□ -1.04
SRP54-203ENST00000553544 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 PMS2P5A8MQ11 134 aa8.53□□□□□ -1.04
SRP54-203ENST00000553544 K7EPK0 472 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms