RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SFT2D2O95562 160 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 IFNA21P01568 189 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 CRYGCP07315 174 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 SULT1A3P0DMM9 295 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 SULT1A4P0DMN0 295 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 SPNP16150 400 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 UCP1P25874 307 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 NPBWR1P48145 328 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 EIF2B2P49770 351 aaKnown RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 SPCS3P61009 180 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 PRCDQ00LT1 54 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 PPP1R1AQ13522 171 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 KLF5Q13887 457 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM128Q5BJH2 165 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 HSD17B13Q7Z5P4 300 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF429Q86V71 674 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 DUSP18Q8NEJ0 188 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 OR9G4Q8NGQ1 327 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 OR5B3Q8NH48 314 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 LHFPL5Q8TAF8 219 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 MYOZ3Q8TDC0 251 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM230Q96A57 120 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 SDHCQ99643 169 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 ATG101Q9BSB4 218 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 MAGT1Q9H0U3 335 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 RBKSQ9H477 322 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 FAM212BQ9NTI7 297 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM14BQ9NUH8 114 aa3.54□□□□□ -1.84
ATXN3-220ENST00000553491 F11RQ9Y624 299 aaKnown RBP3.54□□□□□ -1.84
ATXN3-220ENST00000553491 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IGLV11-55A0A075B6I3 123 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IGHV3OR16-13A0A075B7E8 117 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IGHV3-49A0A0A0MS15 119 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IGHV3-74A0A0B4J1X5 117 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 C5orf51A6NDU8 294 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 WRBO00258 174 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 PLA2G10O15496 165 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 NUPL2O15504 423 aaKnown RBP3.53□□□□□ -1.84
ATXN3-220ENST00000553491 NDUFB6O95139 128 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 MT-CO2P00403 227 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 AMBPP02760 352 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 TCRBP04435 133 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IFNA4P05014 189 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 OR4E1P0C645 316 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 IAPPP10997 89 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 GP9P14770 177 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 OPRK1P41145 380 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 INSL3P51460 131 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 UBE2MP61081 183 aaKnown RBP3.53□□□□□ -1.84
ATXN3-220ENST00000553491 SUPT4H1P63272 117 aaKnown RBP3.53□□□□□ -1.84
ATXN3-220ENST00000553491 SRPXP78539 464 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 ANKRD55Q3KP44 614 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 AKAP14Q86UN6 197 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 OR1P1Q8NH06 330 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 COQ8AQ8NI60 647 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 ENKURQ8TC29 256 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 ASCL2Q99929 193 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 C7orf50Q9BRJ6 194 aaKnown RBP3.53□□□□□ -1.84
ATXN3-220ENST00000553491 TUBA4BQ9H853 241 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 C21orf62Q9NYP8 219 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF256Q9Y2P7 627 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM56-RWDD3S4R434 201 aa3.53□□□□□ -1.84
ATXN3-220ENST00000553491 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 PIGBOS1A0A0B4J2F0 54 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 A0A1B0GU03 582 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 IZUMO1RA6ND01 250 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 K7EIL1 84 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 TGOLN2O43493 480 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 MED6O75586 246 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 ADAP1O75689 374 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 BRI3O95415 125 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
ATXN3-220ENST00000553491 FOLR2P14207 255 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 CBLN1P23435 193 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 HTR2BP41595 481 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 TFPI2P48307 235 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 RAB11AP62491 216 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 IFITM3Q01628 133 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 SPANXN5Q5MJ07 72 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 FFAR4Q5NUL3 377 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 GFI1BQ5VTD9 330 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 LYG2Q86SG7 212 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 GTSCR1Q86UQ5 136 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF502Q8TBZ5 544 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 DTD1Q8TEA8 209 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 TMEM190Q8WZ59 177 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 IL22RA2Q969J5 263 aa3.52□□□□□ -1.85
ATXN3-220ENST00000553491 GALNT14Q96FL9 552 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms