RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NPPCP23582 126 aa11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 EIF2B2P49770 351 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 ZNF345Q14585 488 aa11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 GLMPQ8WWB7 406 aa11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 RFNGQ9Y644 331 aa11.16□□□□□ -0.62
MTHFD1-204ENST00000553405 IGHV3-66A0A0C4DH42 116 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 C1QBP02746 253 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 KCNRGQ8N5I3 272 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 C17orf77Q96MU5 243 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 MFFQ9GZY8 342 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 RABAC1Q9UI14 185 aa11.15□□□□□ -0.62
MTHFD1-204ENST00000553405 NUP62P37198 522 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 RAB31Q13636 194 aa11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 PXMP4Q9Y6I8 212 aa11.14□□□□□ -0.63
MTHFD1-204ENST00000553405 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 H3BRN7 92 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 TSPAN4O14817 238 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 HYPMO75409 117 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 ORM2P19652 201 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 B2MP61769 119 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 GCSAMLQ5JQS6 135 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 MORN5Q5VZ52 161 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 RPL7L1Q6DKI1 246 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 OR1B1Q8NGR6 318 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 SHANK2-AS3Q9BTD1 123 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 ARL6Q9H0F7 186 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 ARV1Q9H2C2 271 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 DOK5Q9P104 306 aa11.13□□□□□ -0.63
MTHFD1-204ENST00000553405 ZNF98A6NK75 572 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 IFNA5P01569 189 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 C1orf194Q5T5A4 169 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 UHRF2Q96PU4 802 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 SCRT1Q9BWW7 348 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 HIGD1AQ9Y241 93 aa11.12□□□□□ -0.63
MTHFD1-204ENST00000553405 A0A1W2PS18 150 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 MRPS12O15235 138 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 ZNF266Q14584 549 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 LAMTOR1Q6IAA8 161 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 LCN12Q6JVE5 192 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 Q8N1Y9 231 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 AURKAIP1Q9NWT8 199 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 TIMM9Q9Y5J7 89 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
MTHFD1-204ENST00000553405 TAAR5O14804 337 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 PRB2P02812 416 aaPredicted RBP11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 GP9P14770 177 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 ATP6V0CP27449 155 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 LEMD1Q68G75 181 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 OR2G3Q8NGZ4 309 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 HYLS1Q96M11 299 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 PRR25Q96S07 402 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 SLC25A32Q9H2D1 315 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 TMEM231Q9H6L2 316 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 DNAJC4Q9NNZ3 241 aa11.1□□□□□ -0.63
MTHFD1-204ENST00000553405 HUWE1Q7Z6Z7 4374 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 A0A0D9SG52 128 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 CD5P06127 495 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 OR5G3P0C626 314 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 BMI1P35226 326 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 TMUB2Q71RG4 321 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 LINC00305Q7Z4B0 112 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 C9orf62Q8N4C0 152 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 HSD17B11Q8NBQ5 300 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 DCANP1Q8TF63 244 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 GATAD1Q8WUU5 269 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 MS4A6AQ9H2W1 248 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
MTHFD1-204ENST00000553405 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 K7EIL1 84 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 BCL2L11O43521 198 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 C10orf113Q5VZT2 155 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 SPATA31B1PQ5VZV4 182 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 SIGLEC15Q6ZMC9 328 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 Q6ZRG5 221 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 RBPMS2Q6ZRY4 209 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 FAM24BQ8N5W8 94 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 OR1L4Q8NGR5 311 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 GRAMD2BQ96HH9 432 aa11.08□□□□□ -0.64
MTHFD1-204ENST00000553405 FAM167A-AS1Q96KT0 104 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms