RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 RTL8CO15255 209 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 GATA2P23769 480 aaPredicted RBP8.18□□□□□ -1.1
NEK3-204ENST00000552973 TNFSF8P32971 234 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 PSMB3P49720 205 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 RAB11AP62491 216 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 PSG9Q00887 426 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 C1orf158Q8N1D5 194 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 RAB2BQ8WUD1 216 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 C20orf173Q96LM9 149 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 MAGT1Q9H0U3 335 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 SLC25A22Q9H936 323 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 CCDC59Q9P031 241 aaKnown RBP8.18□□□□□ -1.1
NEK3-204ENST00000552973 RABL2AQ9UBK7 228 aaPredicted RBP8.18□□□□□ -1.1
NEK3-204ENST00000552973 DKK2Q9UBU2 259 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 RSL24D1Q9UHA3 163 aaKnown RBP8.18□□□□□ -1.1
NEK3-204ENST00000552973 RABL2BQ9UNT1 228 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 RFNGQ9Y644 331 aa8.18□□□□□ -1.1
NEK3-204ENST00000552973 TMEM189A5PLL7 270 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 PITX3O75364 302 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 IFNA21P01568 189 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 PRM2P04554 102 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 FABP1P07148 127 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 VAMP1P23763 118 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 ATP5IP56385 69 aaPredicted RBP8.17□□□□□ -1.1
NEK3-204ENST00000552973 SRPXP78539 464 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 ZNF79Q15937 498 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 C1orf194Q5T5A4 169 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 IGFL4Q6B9Z1 124 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 TMEM182Q6ZP80 229 aaPredicted RBP8.17□□□□□ -1.1
NEK3-204ENST00000552973 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 TRGV9Q99603 122 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 SOSTQ9BQB4 213 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 NIPSNAP3BQ9BS92 247 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 RSG1Q9BU20 258 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 SLIRPQ9GZT3 109 aaKnown RBP8.17□□□□□ -1.1
NEK3-204ENST00000552973 SLC25A32Q9H2D1 315 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 GOLT1BQ9Y3E0 138 aa8.17□□□□□ -1.1
NEK3-204ENST00000552973 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
NEK3-204ENST00000552973 A0A0J9YX75 114 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 LOC102723971A0A1B0GUV8 181 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 WRBO00258 174 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 ISLRO14498 428 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 HBE1P02100 147 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 ORM2P19652 201 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 TMBIM6P55061 237 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 C17orf77Q96MU5 243 aa8.16□□□□□ -1.1
NEK3-204ENST00000552973 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 HOXB5P09067 269 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 GALR1P47211 349 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 PAX9P55771 341 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 FGL1Q08830 312 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 RRN3P1Q2M238 152 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 PYDC2Q56P42 97 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 TMEM128Q5BJH2 165 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 SPANXN5Q5MJ07 72 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 TOMM5Q8N4H5 51 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 THAP8Q8NA92 274 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 MCFD2Q8NI22 146 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 CLUHP3Q96NS8 147 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 TMEM208Q9BTX3 173 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 RPRMQ9NS64 109 aa8.15□□□□□ -1.1
NEK3-204ENST00000552973 DUXBA0A1W2PPF3 345 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 H3BMQ9 156 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 H3BP45 60 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 SYNGR2O43760 224 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 MED6O75586 246 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 SFT2D2O95562 160 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 PRB4P10163 310 aaPredicted RBP8.14□□□□□ -1.11
NEK3-204ENST00000552973 FAUP35544 74 aaKnown RBP8.14□□□□□ -1.11
NEK3-204ENST00000552973 PPP1R1AQ13522 171 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 LGALS9BQ3B8N2 356 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 SPATA31B1PQ5VZV4 182 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 GGNBP1Q5YKI7 109 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 TMEM88Q6PEY1 159 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 DOK5Q9P104 306 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 DNAH2Q9P225 4427 aa8.14□□□□□ -1.11
NEK3-204ENST00000552973 DNAH6Q9C0G6 4158 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 ZNF705GA8MUZ8 300 aaPredicted RBP8.13□□□□□ -1.11
NEK3-204ENST00000552973 PRSS46E5RG02 174 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 M0R2Z0 102 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 NOL3O60936 208 aaKnown RBP8.13□□□□□ -1.11
NEK3-204ENST00000552973 CNN1P51911 297 aaKnown RBP8.13□□□□□ -1.11
NEK3-204ENST00000552973 DAD1P61803 113 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 RPP30P78346 268 aaKnown RBP8.13□□□□□ -1.11
NEK3-204ENST00000552973 AKR1C1Q04828 323 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 SPINK13Q1W4C9 94 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 AMTNQ6UX39 209 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 RNF182Q8N6D2 247 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 LRTM2Q8N967 370 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 BPIFCQ8NFQ6 507 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 TRIM63Q969Q1 353 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 IGF2BP2-AS1Q96M15 143 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 CIB3Q96Q77 187 aaPredicted RBP8.13□□□□□ -1.11
NEK3-204ENST00000552973 BCL7BQ9BQE9 202 aa8.13□□□□□ -1.11
NEK3-204ENST00000552973 TMEM147Q9BVK8 224 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms