RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PPP1R1CQ8WVI7 109 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 MS4A6AQ9H2W1 248 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 SLC45A2Q9UMX9 530 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 TMEM217Q8N7C4 229 aa12.92□□□□□ -0.34
CDK4-208ENST00000551706 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
CDK4-208ENST00000551706 SLC25A31Q9H0C2 315 aa12.92□□□□□ -0.34
CDK4-208ENST00000551706 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
CDK4-208ENST00000551706 IGSF23A1L1A6 192 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 TFPI2P48307 235 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 C1orf194Q5T5A4 169 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 GBGT1Q8N5D6 347 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 ASCL2Q99929 193 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 WFDC10AQ9H1F0 79 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 MED28Q9H204 178 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 UQCC1Q9NVA1 299 aa12.91□□□□□ -0.34
CDK4-208ENST00000551706 RAB31Q13636 194 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 ATP6V1FQ16864 119 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 S100A7AQ86SG5 101 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 STXBP6Q8NFX7 210 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 TMEM147Q9BVK8 224 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 OR5AC2Q9NZP5 309 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 FBXL17Q9UF56 701 aa12.9□□□□□ -0.34
CDK4-208ENST00000551706 H0YIZ8 118 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 MPC2O95563 127 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 LINC00869P0C866 280 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 ORM2P19652 201 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 GATA2P23769 480 aaPredicted RBP12.89□□□□□ -0.35
CDK4-208ENST00000551706 BAXQ07812 192 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 VWC2Q2TAL6 325 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
CDK4-208ENST00000551706 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
CDK4-208ENST00000551706 WFDC3Q8IUB2 231 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
CDK4-208ENST00000551706 RBMY1BA6NDE4 496 aaKnown RBP12.88□□□□□ -0.35
CDK4-208ENST00000551706 RBMY1EA6NEQ0 496 aaKnown RBP12.88□□□□□ -0.35
CDK4-208ENST00000551706 AGPAT2O15120 278 aa12.88□□□□□ -0.35
CDK4-208ENST00000551706 RBMY1DP0C7P1 496 aaKnown RBP12.88□□□□□ -0.35
CDK4-208ENST00000551706 PLP1P60201 277 aa12.88□□□□□ -0.35
CDK4-208ENST00000551706 RAP2BP61225 183 aa12.88□□□□□ -0.35
CDK4-208ENST00000551706 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDK4-208ENST00000551706 PXDC1Q5TGL8 231 aa12.88□□□□□ -0.35
CDK4-208ENST00000551706 Q6ZNX1 250 aa12.88□□□□□ -0.35
CDK4-208ENST00000551706 OR1B1Q8NGR6 318 aa12.88□□□□□ -0.35
CDK4-208ENST00000551706 K7EQG2 157 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 HYPMO75409 117 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 CXCL3P19876 107 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 HAGHQ16775 308 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 DCANP1Q8TF63 244 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 ASB13Q8WXK3 278 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 RNF126Q9BV68 326 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 GGTLC1Q9BX51 225 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 RNF24Q9Y225 148 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 WDR83OSQ9Y284 106 aa12.87□□□□□ -0.35
CDK4-208ENST00000551706 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
CDK4-208ENST00000551706 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 CAMLGP49069 296 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 FCN2Q15485 313 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 STPG3Q8N7X2 389 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 GPR82Q96P67 336 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 MGST2Q99735 147 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 TM2D3Q9BRN9 247 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
CDK4-208ENST00000551706 HIGD1AQ9Y241 93 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 CSMD3Q7Z407 3707 aa12.86□□□□□ -0.35
CDK4-208ENST00000551706 UBE2L5PA0A1B0GUS4 154 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 MPDU1O75352 247 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 LYL1P12980 280 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 NHLH2Q02577 135 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 SAMD13Q5VXD3 122 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 OR5C1Q8NGR4 320 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 CITED4Q96RK1 184 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 DOK5Q9P104 306 aa12.85□□□□□ -0.35
CDK4-208ENST00000551706 OR5G3P0C626 314 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 GALR1P47211 349 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 DEFB131AP59861 70 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
CDK4-208ENST00000551706 Q6ZRG5 221 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 CHAC2Q8WUX2 184 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 SLC25A39Q9BZJ4 359 aaPredicted RBP12.84□□□□□ -0.35
CDK4-208ENST00000551706 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
CDK4-208ENST00000551706 ELOA3CA0A087WX78 387 aaPredicted RBP12.83□□□□□ -0.36
CDK4-208ENST00000551706 H3BRN7 92 aa12.83□□□□□ -0.36
CDK4-208ENST00000551706 GIPP09681 153 aaPredicted RBP12.83□□□□□ -0.36
CDK4-208ENST00000551706 FGF7P21781 194 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms