RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 RFPL4AA6NLU0 287 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 RFPL4AL1F8VTS6 287 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 LY6LH3BQJ8 138 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 M0R036 132 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 BHLHE40O14503 412 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 SOCS1O15524 211 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 PDCD6O75340 191 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 IGHV3-7P01780 117 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 ASAH2BP0C7U1 165 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF728P0DKX0 622 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 PSKH1P11801 424 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 M6PRP20645 277 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 NPY1RP25929 384 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 GUCA1AP43080 201 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-208ENST00000551691 MAGEA12P43365 314 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 SULT1A2P50226 295 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 AP2S1P53680 142 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-208ENST00000551691 RUNX1Q01196 453 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 CKAP4Q07065 602 aaKnown RBP2.43□□□□□ -2.02
LIMA1-208ENST00000551691 HES1Q14469 280 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 RGS21Q2M5E4 152 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 HLA-DRB5Q30154 266 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 DEFB135Q30KP9 77 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 COX19Q49B96 90 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 KLHL12Q53G59 568 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 RNASE13Q5GAN3 156 aaKnown RBP2.43□□□□□ -2.02
LIMA1-208ENST00000551691 GLYATL3Q5SZD4 288 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF684Q5T5D7 378 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 C1orf134Q5TEV5 83 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 DNM1P34Q6PK57 102 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 TCF23Q7RTU1 214 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF676Q8N7Q3 588 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 OR52L1Q8NGH7 329 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 OR8S1Q8NH09 359 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 MYOZ3Q8TDC0 251 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 RNF133Q8WVZ7 376 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 MAL2Q969L2 176 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 SLC25A46Q96AG3 418 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 C12orf43Q96C57 262 aaKnown RBP2.43□□□□□ -2.02
LIMA1-208ENST00000551691 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 INIPQ9NRY2 104 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 PYCARDQ9ULZ3 195 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 POMPQ9Y244 141 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 DNAJC15Q9Y5T4 150 aa2.43□□□□□ -2.02
LIMA1-208ENST00000551691 IGHV1-3A0A0C4DH29 117 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 FAM183AA6NL82 134 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF850A8MQ14 1090 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 M0QZK8 103 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 LGALS9O00182 355 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 AZIN1O14977 448 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 MAGEB4O15481 346 aaPredicted RBP2.42□□□□□ -2.02
LIMA1-208ENST00000551691 FGF16O43320 207 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 SEC11BP0C7V7 166 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 CD34P28906 385 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 S100A2P29034 98 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 CLDN12P56749 244 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 FAM3AP98173 230 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 SMAGPQ0VAQ4 97 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 CASP8Q14790 479 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 COQ5Q5HYK3 327 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 FAM162BQ5T6X4 162 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 C5orf46Q6UWT4 87 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 SLC51BQ86UW2 128 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 Q8N402 240 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 C15orf56Q8N910 161 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 PFN4Q8NHR9 129 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 UBALD1Q8TB05 177 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 TMEM106AQ96A25 262 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 TESCQ96BS2 214 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 SMIM19Q96E16 107 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 DERL3Q96Q80 235 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 SLC22A4Q9H015 551 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 TMEM133Q9H2Q1 129 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 PRR34Q9NV39 138 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 LHFPL6Q9Y693 200 aa2.42□□□□□ -2.02
LIMA1-208ENST00000551691 A0A1B0GXF2 115 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 C7orf66A4D0T2 115 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 CPSF4LA6NMK7 179 aaKnown RBP2.41□□□□□ -2.02
LIMA1-208ENST00000551691 LEUTXA8MZ59 168 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 TMEM114B3SHH9 223 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 ZNF736B4DX44 427 aaPredicted RBP2.41□□□□□ -2.02
LIMA1-208ENST00000551691 F5H768 121 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 BUB1B-PAK6H3BSN5 160 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 BIRC5O15392 142 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 GYG2O15488 501 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 ARL6IP5O75915 188 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 OR5F1O95221 314 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 NRASP01111 189 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 HRASP01112 189 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 KRASP01116 189 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 IGKV1D-33P01593 117 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 IGKV1-33P01594 117 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 IGLV2-8P01709 118 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 TYMSP04818 313 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 IFNGR2P38484 337 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 EDDM3BP56851 147 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 HIST1H3AP68431 136 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 DR1Q01658 176 aa2.41□□□□□ -2.02
LIMA1-208ENST00000551691 PTGES3Q15185 160 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms