RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 IGHV1-58A0A0C4DH39 117 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 ERP29P30040 261 aaKnown RBP0.44□□□□□ -2.34
SCAF11-215ENST00000551391 ROMO1P60602 79 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 ERVS71-1P61550 626 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 SPA17Q15506 151 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 LIN52Q52LA3 116 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 AKIRIN2Q53H80 203 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 ZNF833PQ6ZTB9 187 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 OR2T35Q8NGX2 323 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 LINC00052Q96N35 136 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 TP53RKQ96S44 253 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 KIFC1Q9BW19 673 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 IMUPQ9GZP8 106 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
SCAF11-215ENST00000551391 SCN10AQ9Y5Y9 1956 aa0.44□□□□□ -2.34
SCAF11-215ENST00000551391 FAM159BA6NKW6 160 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 NDUFB3O43676 98 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 CYBAP13498 195 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 DEFA3P59666 94 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 GRINAQ7Z429 371 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 GKN2Q86XP6 184 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 PDZD9Q8IXQ8 264 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 STAG3L4Q8TBR4 150 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 ARHGEF11O15085 1522 aa0.43□□□□□ -2.34
SCAF11-215ENST00000551391 MYH7BA7E2Y1 1941 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 IGLV3-32A0A0A0MS00 114 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 TLCD2A6NGC4 264 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 E7EUB6 86 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 CTXN2P0C2S0 81 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 ATP5G3P48201 142 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 SERPINB9P50453 376 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 DSCR4P56555 118 aaPredicted RBP0.42□□□□□ -2.34
SCAF11-215ENST00000551391 BCL2L15Q5TBC7 163 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 KRTAP26-1Q6PEX3 210 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 SPATA8Q6RVD6 105 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 C4orf22Q6V702 233 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 OR10K1Q8NGX5 313 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 SLC25A21Q9BQT8 299 aaPredicted RBP0.42□□□□□ -2.34
SCAF11-215ENST00000551391 TAS2R7Q9NYW3 318 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 LY96Q9Y6Y9 160 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 ALPK3Q96L96 1907 aa0.42□□□□□ -2.34
SCAF11-215ENST00000551391 PCF11O94913 1555 aaKnown RBP0.41□□□□□ -2.34
SCAF11-215ENST00000551391 GGCTO75223 188 aaKnown RBP0.41□□□□□ -2.34
SCAF11-215ENST00000551391 IFNA7P01567 189 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 CST2P09228 141 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 HOXA6P31267 233 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 MYL5Q02045 173 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 HAGHLQ6PII5 290 aaPredicted RBP0.41□□□□□ -2.34
SCAF11-215ENST00000551391 LINC00575Q6W349 94 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 GOLT1AQ6ZVE7 132 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 MNS1Q8NEH6 495 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 CANT1Q8WVQ1 401 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 LYSMD1Q96S90 227 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 C10orf95Q9H7T3 257 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 PCTPQ9UKL6 214 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 PLXNA4Q9HCM2 1894 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 CECR2Q9BXF3 1484 aa0.41□□□□□ -2.34
SCAF11-215ENST00000551391 A0A087WSZ3 146 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 TRAV10A0A0B4J240 114 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 TAX1BP3O14907 124 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 UBE2BP63146 152 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 OR5D14Q8NGL3 314 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 OR10X1Q8NGY0 326 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 TEX37Q96LM6 180 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 TNFSF18Q9UNG2 199 aa0.4□□□□□ -2.35
SCAF11-215ENST00000551391 MYH10P35580 1976 aa0.39□□□□□ -2.35
SCAF11-215ENST00000551391 CASP8AP2Q9UKL3 1982 aa0.39□□□□□ -2.35
SCAF11-215ENST00000551391 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
SCAF11-215ENST00000551391 PHRF1Q9P1Y6 1649 aaKnown RBP0.39□□□□□ -2.35
SCAF11-215ENST00000551391 SNRNP200O75643 2136 aaKnown RBP0.39□□□□□ -2.35
SCAF11-215ENST00000551391 KLF7O75840 302 aaPredicted RBP0.39□□□□□ -2.35
SCAF11-215ENST00000551391 FADDQ13158 208 aa0.39□□□□□ -2.35
SCAF11-215ENST00000551391 PRRT1Q99946 306 aa0.39□□□□□ -2.35
SCAF11-215ENST00000551391 FAM32AQ9Y421 112 aaKnown RBP0.39□□□□□ -2.35
SCAF11-215ENST00000551391 RFX7Q2KHR2 1363 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 OR2T8A6NH00 312 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 C17orf112F2Z3M2 114 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 M0R378 163 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 ERC2-IT1O76042 136 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 IGLV3-1P01715 115 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 HSPE1P61604 102 aaKnown RBP0.38□□□□□ -2.35
SCAF11-215ENST00000551391 ZNF431Q8TF32 576 aaPredicted RBP0.38□□□□□ -2.35
SCAF11-215ENST00000551391 PSTPIP2Q9H939 334 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 ENY2Q9NPA8 101 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 ARL2BPQ9Y2Y0 163 aa0.38□□□□□ -2.35
SCAF11-215ENST00000551391 B4DSR2 109 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 F8W1H4 67 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 TMEM256-PLSCR3K7ERE1 68 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 HMGB3O15347 200 aaKnown RBP0.37□□□□□ -2.35
SCAF11-215ENST00000551391 SERPINA1P01009 418 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 C1QBP02746 253 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 IFNA6P05013 189 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 CD2P06729 351 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 CXCL8P10145 99 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 HLA-EP13747 358 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 COX7CP15954 63 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 TEN1Q86WV5 123 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 PSMF1Q92530 271 aa0.37□□□□□ -2.35
SCAF11-215ENST00000551391 MUCL1Q96DR8 90 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms