RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, human

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX54-208	ENST00000551344	NPVF	Q9HCQ7	196 aa		13.91	□□□□□ -0.18
DDX54-208	ENST00000551344	SMCO3	A2RU48	225 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	C7orf66	A4D0T2	115 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	C5orf51	A6NDU8	294 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	KNCN	A6PVL3	124 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	FAM25E	A8MYX2	175 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	CCS	O14618	274 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	IL5	P05113	134 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	SPP1	P10451	314 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	ACTL10	Q5JWF8	245 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	C2orf50	Q96LR7	162 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	BATF3	Q9NR55	127 aa		13.9	□□□□□ -0.18
DDX54-208	ENST00000551344	CSMD3	Q7Z407	3707 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	AGRN	O00468	2067 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	ORM2	P19652	201 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	GATA2	P23769	480 aa	Predicted RBP	13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	ID1	P41134	155 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	SELENOT	P62341	195 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	CYP2G1P	Q6ZSU1	146 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	OR11H2	Q8NH07	326 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	GGACT	Q9BVM4	153 aa		13.89	□□□□□ -0.19
DDX54-208	ENST00000551344	ZNF98	A6NK75	572 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344		L7N2F9	121 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	CCNK	O75909	580 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	RRAS2	P62070	204 aa	Predicted RBP	13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	VAMP2	P63027	116 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	SAMD13	Q5VXD3	122 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	ENKUR	Q8TC29	256 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	TMEM147	Q9BVK8	224 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	MGAT4C	Q9UBM8	478 aa		13.88	□□□□□ -0.19
DDX54-208	ENST00000551344	TENM2	Q9NT68	2774 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344		K7EPK0	472 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	DEDD	O75618	318 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	GIG44	P09565	113 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	GALR1	P47211	349 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	PLP1	P60201	277 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	TEPP	Q6URK8	271 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	GSG1L	Q6UXU4	331 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	OR1B1	Q8NGR6	318 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	GPR82	Q96P67	336 aa		13.87	□□□□□ -0.19
DDX54-208	ENST00000551344	LCE6A	A0A183	80 aa		13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	PSMB3	P49720	205 aa		13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	MEOX2	P50222	304 aa		13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	NUTF2	P61970	127 aa	Known RBP	13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	IFITM3	Q01628	133 aa		13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	IL15RA	Q13261	267 aa		13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	GPN1	Q9HCN4	374 aa	Predicted RBP	13.86	□□□□□ -0.19
DDX54-208	ENST00000551344	LSM5	Q9Y4Y9	91 aa	Known RBP	13.86	□□□□□ -0.19
DDX54-208	ENST00000551344		H3BMM0	161 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	ISLR	O14498	428 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	SOCS3	O14543	225 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	HYPM	O75409	117 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	PVALB	P20472	110 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	RAP2B	P61225	183 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	ARL16	Q0P5N6	197 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	S100A7A	Q86SG5	101 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	LINC00052	Q96N35	136 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	SLC25A22	Q9H936	323 aa		13.85	□□□□□ -0.19
DDX54-208	ENST00000551344	LINC00869	P0C866	280 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	HLA-DRB4	P13762	266 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	BCAP31	P51572	246 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	RSG1	Q9BU20	258 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	C1QTNF4	Q9BXJ3	329 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	SLC25A32	Q9H2D1	315 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	C11orf68	Q9H3H3	251 aa	Known RBP	13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	C11orf1	Q9H5F2	150 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	HIGD1A	Q9Y241	93 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	HLA-DRB4	X5D2U9	266 aa		13.84	□□□□□ -0.19
DDX54-208	ENST00000551344	CXorf65	A6NEN9	183 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	C4BPB	P20851	252 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	CAV2	P51636	162 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	PXDC1	Q5TGL8	231 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	SPATA31B1P	Q5VZV4	182 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	FOXI2	Q6ZQN5	318 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	NRARP	Q7Z6K4	114 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	CSNK1G2-AS1	Q8NCQ2	148 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	SHANK2-AS3	Q9BTD1	123 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	RNF24	Q9Y225	148 aa		13.83	□□□□□ -0.2
DDX54-208	ENST00000551344	STARD9	Q9P2P6	4700 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344		H3BRN7	92 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	GOSR2	O14653	212 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	PRAF2	O60831	178 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	OR5G3	P0C626	314 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	C16orf92	Q96LL3	132 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	CLUHP3	Q96NS8	147 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	SAV1	Q9H4B6	383 aa	Predicted RBP	13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	DOK5	Q9P104	306 aa		13.82	□□□□□ -0.2
DDX54-208	ENST00000551344	NUPR2	A6NF83	97 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	FAM24A	A6NFZ4	105 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	INMT-MINDY4	F8WBC2	141 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	AGPAT2	O15120	278 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	JTB	O76095	146 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	RPL7	P18124	248 aa	Known RBP	13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	DEFA1	P59665	94 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	DEFA3	P59666	94 aa		13.81	□□□□□ -0.2
DDX54-208	ENST00000551344	SLC38A11	Q08AI6	406 aa		13.81	□□□□□ -0.2

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