RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 PITPNC1Q9UKF7 332 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 COL8A1P27658 744 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 TXN2Q99757 166 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
SCN8A-206ENST00000550891 GAR1Q9NY12 217 aaKnown RBP12.19□□□□□ -0.46
SCN8A-206ENST00000550891 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCN8A-206ENST00000550891 H3BUX3 64 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 C5orf17Q8NAS9 161 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 IMMP2LQ96T52 175 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 G3V318 75 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 AP4M1O00189 453 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 OR5I1Q13606 314 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 BAGE2Q86Y30 109 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 Q9H3A6 140 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 GNB4Q9HAV0 340 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 TMEM14CQ9P0S9 112 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 EPDR1Q9UM22 224 aa12.18□□□□□ -0.46
SCN8A-206ENST00000550891 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 RPL19P84098 196 aaKnown RBP12.17□□□□□ -0.46
SCN8A-206ENST00000550891 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 SMUG1Q53HV7 270 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 SERTAD4Q9NUC0 356 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 K7EN84 100 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 TGFAP01135 160 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 GNG5P63218 68 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 MS4A10Q96PG2 267 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 GGCTO75223 188 aaKnown RBP12.17□□□□□ -0.46
SCN8A-206ENST00000550891 GPR183P32249 361 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 NDUFA6P56556 154 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
SCN8A-206ENST00000550891 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 H3BRN7 92 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 M0QZK8 103 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 FOXL1Q12952 345 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 EEF1AKMT3Q96AZ1 226 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 ATG101Q9BSB4 218 aa12.16□□□□□ -0.46
SCN8A-206ENST00000550891 WI2-2373I1.2A0A1W2PRP0 233 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 ZNF98A6NK75 572 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 BMPR1BO00238 502 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 SLC17A3O00476 420 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 NHLRC2Q8NBF2 726 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 OTORQ9NRC9 128 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 C5orf52A6NGY3 159 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 USF2Q15853 346 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-206ENST00000550891 RPEL1Q2QD12 228 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 IBA57Q5T440 356 aaKnown RBP12.15□□□□□ -0.46
SCN8A-206ENST00000550891 IL36BQ9NZH7 164 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 RABAC1Q9UI14 185 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 ANKRD17O75179 2603 aaKnown RBP12.15□□□□□ -0.46
SCN8A-206ENST00000550891 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 MAPK1IP1LQ8NDC0 245 aa12.15□□□□□ -0.46
SCN8A-206ENST00000550891 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-206ENST00000550891 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 CLEC3BP05452 202 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 S100A9P06702 114 aaKnown RBP12.14□□□□□ -0.47
SCN8A-206ENST00000550891 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 ISLRO14498 428 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 CTSGP08311 255 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 PRR27Q6MZM9 219 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 PIFOQ8TCI5 191 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 RNASE7Q9H1E1 156 aaKnown RBP12.14□□□□□ -0.47
SCN8A-206ENST00000550891 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 ZNF586Q9NXT0 402 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
SCN8A-206ENST00000550891 J3QLI3 93 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 K7EQM0 130 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 GCGP01275 180 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 DEFB113Q30KQ7 82 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 IGF2BP2-AS1Q96M15 143 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 ZNF705GA8MUZ8 300 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-206ENST00000550891 F8W735 103 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 RPL7P18124 248 aaKnown RBP12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BBP33778 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 MYCNOSP40205 109 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BDP58876 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BCP62807 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST2H2BEQ16778 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-206ENST00000550891 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 FRZBQ92765 325 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BHQ93079 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BNQ99877 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 HIST1H2BMQ99879 126 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms