RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 S100PP25815 95 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 NDUFA6P56556 154 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 ZNF600Q6ZNG1 722 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 SGMS2Q8NHU3 365 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 DOPEY2Q9Y3R5 2298 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 HLA-DRB1P01911 266 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 MGST1P10620 155 aaKnown RBP16.42■□□□□ 0.22
PRDM4-205ENST00000550376 GP9P14770 177 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 ZNF491Q8N8L2 437 aa16.42■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BKO60814 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BJP06899 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BOP23527 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BBP33778 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BDP58876 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BCP62807 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST2H2BEQ16778 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BHQ93079 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BNQ99877 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 HIST1H2BMQ99879 126 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 C21orf62Q9NYP8 219 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 GOSR1O95249 250 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 FCGR2BP31994 310 aaPredicted RBP16.41■□□□□ 0.22
PRDM4-205ENST00000550376 ERVFC1-1P60608 527 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 USF2Q15853 346 aaPredicted RBP16.41■□□□□ 0.22
PRDM4-205ENST00000550376 C9orf152Q5JTZ5 239 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 OR10G8Q8NGN5 311 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 TLN2Q9Y4G6 2542 aa16.41■□□□□ 0.22
PRDM4-205ENST00000550376 ISLRO14498 428 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 MFAP4P55083 255 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 PLP1P60201 277 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 CHRDL1Q9BU40 450 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 MRPL27Q9P0M9 148 aaKnown RBP16.4■□□□□ 0.22
PRDM4-205ENST00000550376 ARL2-SNX15V9GYD0 113 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 AMY1AP04745 511 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 TRGC1P0CF51 173 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 OR1L6Q8NGR2 347 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 RNF125Q96EQ8 232 aa16.4■□□□□ 0.22
PRDM4-205ENST00000550376 IGLV2-8P01709 118 aa16.39■□□□□ 0.22
PRDM4-205ENST00000550376 SLC25A5P05141 298 aaKnown RBP16.39■□□□□ 0.22
PRDM4-205ENST00000550376 EXOC3-AS1Q8N2X6 119 aa16.39■□□□□ 0.22
PRDM4-205ENST00000550376 C5orf56Q8N8D9 126 aa16.39■□□□□ 0.22
PRDM4-205ENST00000550376 ZNF586Q9NXT0 402 aa16.39■□□□□ 0.22
PRDM4-205ENST00000550376 CCDC168Q8NDH2 2452 aa16.39■□□□□ 0.21
PRDM4-205ENST00000550376 C9JCJ5 164 aa16.39■□□□□ 0.21
PRDM4-205ENST00000550376 C15orf32Q32M92 178 aa16.39■□□□□ 0.21
PRDM4-205ENST00000550376 GFI1BQ5VTD9 330 aa16.39■□□□□ 0.21
PRDM4-205ENST00000550376 PEX7O00628 323 aa16.38■□□□□ 0.21
PRDM4-205ENST00000550376 PPP5D1E7EU14 171 aa16.38■□□□□ 0.21
PRDM4-205ENST00000550376 FRMD6-AS1P0C7T7 363 aa16.38■□□□□ 0.21
PRDM4-205ENST00000550376 PDZD11Q5EBL8 140 aa16.38■□□□□ 0.21
PRDM4-205ENST00000550376 PYGO2Q9BRQ0 406 aa16.38■□□□□ 0.21
PRDM4-205ENST00000550376 ZNF320A2RRD8 509 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 AP4M1O00189 453 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 SPINK4O60575 86 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 MYCNOSP40205 109 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 HIST2H2BCQ6DN03 193 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 IGF2BP2-AS1Q96M15 143 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 ASCL2Q99929 193 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 TOMM40O96008 361 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 CA1P00915 261 aaPredicted RBP16.37■□□□□ 0.21
PRDM4-205ENST00000550376 CTSGP08311 255 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 RHOGP84095 191 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 Q71RC1 249 aaPredicted RBP16.37■□□□□ 0.21
PRDM4-205ENST00000550376 STXBP6Q8NFX7 210 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 Q9H3A6 140 aa16.37■□□□□ 0.21
PRDM4-205ENST00000550376 HELZ2Q9BYK8 2649 aaKnown RBP16.37■□□□□ 0.21
PRDM4-205ENST00000550376 H3BUX3 64 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 PHOX2AO14813 284 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 GPR183P32249 361 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 ADMP35318 185 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 ZMAT5Q9UDW3 170 aaKnown RBP16.36■□□□□ 0.21
PRDM4-205ENST00000550376 EPDR1Q9UM22 224 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 B4DSR2 109 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 SLC35B1P78383 322 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 THYN1Q9P016 225 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 CREBBPQ92793 2442 aa16.36■□□□□ 0.21
PRDM4-205ENST00000550376 GGCTO75223 188 aaKnown RBP16.35■□□□□ 0.21
PRDM4-205ENST00000550376 CD99P14209 185 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 SRP14P37108 136 aaKnown RBP16.35■□□□□ 0.21
PRDM4-205ENST00000550376 PRR27Q6MZM9 219 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 Q6ZS46 218 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 SRD5A3Q9H8P0 318 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 TRAV8-1A0A0A6YYK1 113 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 CLEC3BP05452 202 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 TCL1AP56279 114 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 KCNIP4Q6PIL6 250 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 SHANK2-AS3Q9BTD1 123 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 SERTAD4Q9NUC0 356 aa16.35■□□□□ 0.21
PRDM4-205ENST00000550376 RNF223E7ERA6 249 aa16.34■□□□□ 0.21
PRDM4-205ENST00000550376 UBE2CO00762 179 aa16.34■□□□□ 0.21
PRDM4-205ENST00000550376 CNN1P51911 297 aaKnown RBP16.34■□□□□ 0.21
PRDM4-205ENST00000550376 BAGE2Q86Y30 109 aa16.34■□□□□ 0.21
PRDM4-205ENST00000550376 V9GYV3 84 aa16.34■□□□□ 0.21
PRDM4-205ENST00000550376 WI2-2373I1.2A0A1W2PRP0 233 aa16.34■□□□□ 0.21
PRDM4-205ENST00000550376 MEOX2P50222 304 aa16.34■□□□□ 0.21
PRDM4-205ENST00000550376 FAM110DQ8TAY7 271 aaPredicted RBP16.34■□□□□ 0.21
PRDM4-205ENST00000550376 NOL4LQ96MY1 436 aaPredicted RBP16.34■□□□□ 0.21
PRDM4-205ENST00000550376 PPP1R2P9O14990 202 aa16.33■□□□□ 0.21
PRDM4-205ENST00000550376 BLCAPP62952 87 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms