RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 AKAIN1P0CW23 69 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 PSG1P11464 419 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 PSMB3P49720 205 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 ATP5IP56385 69 aaPredicted RBP5.46□□□□□ -1.54
NEK3-201ENST00000550331 ZNF767PQ75MW2 155 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 OR51G1Q8NGK1 321 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 OR4C16Q8NGL9 310 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 FAM210BQ96KR6 192 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 CLUHP3Q96NS8 147 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 NAA50Q9GZZ1 169 aaKnown RBP5.46□□□□□ -1.54
NEK3-201ENST00000550331 MIXL1Q9H2W2 232 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 RABL2AQ9UBK7 228 aaPredicted RBP5.46□□□□□ -1.54
NEK3-201ENST00000550331 HSPB7Q9UBY9 170 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 RABL2BQ9UNT1 228 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 GPR132Q9UNW8 380 aa5.46□□□□□ -1.54
NEK3-201ENST00000550331 A0A0B4J2A0 478 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 PIGBOS1A0A0B4J2F0 54 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 TEX48A0A1B0GUV7 120 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 PRSS29PA6NIE9 313 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 RGS5O15539 181 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 FABP1P07148 127 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 SMIM18P0DKX4 95 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 GPX4P36969 197 aaPredicted RBP5.45□□□□□ -1.54
NEK3-201ENST00000550331 CCR6P51684 374 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 KLF9Q13886 244 aaPredicted RBP5.45□□□□□ -1.54
NEK3-201ENST00000550331 SMCO1Q147U7 214 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 C1orf194Q5T5A4 169 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 SAMD13Q5VXD3 122 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 SPATA31B1PQ5VZV4 182 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 FOXI2Q6ZQN5 318 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 LGI3Q8N145 548 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 OR51S1Q8NGJ8 323 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 DTD1Q8TEA8 209 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 SCGB3A2Q96PL1 93 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 SAV1Q9H4B6 383 aaPredicted RBP5.45□□□□□ -1.54
NEK3-201ENST00000550331 SHPKQ9UHJ6 478 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 KCNIP3Q9Y2W7 256 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 RFNGQ9Y644 331 aa5.45□□□□□ -1.54
NEK3-201ENST00000550331 ANKRD20A5PA0PJZ0 165 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 ZFP92A6NM28 416 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 SOCS3O14543 225 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 CTDSP2O14595 271 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 ID1P41134 155 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 SUPT4H1P63272 117 aaKnown RBP5.44□□□□□ -1.54
NEK3-201ENST00000550331 SRPXP78539 464 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 OXA1LQ15070 435 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 LGALS9BQ3B8N2 356 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 GDF5OSQ5U4N7 250 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 CLVS1Q8IUQ0 354 aaPredicted RBP5.44□□□□□ -1.54
NEK3-201ENST00000550331 ZNF709Q8N972 641 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 COQ8AQ8NI60 647 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 PBDC1Q9BVG4 233 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 SCRT1Q9BWW7 348 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 WDR12Q9GZL7 423 aaKnown RBP5.44□□□□□ -1.54
NEK3-201ENST00000550331 LRP1BQ9NZR2 4599 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 SCP2D1Q9UJQ7 156 aa5.44□□□□□ -1.54
NEK3-201ENST00000550331 IGKV1D-37A0A075B6S9 117 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 SNRPGP15A8MWD9 76 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 ISLRO14498 428 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 RTL8CO15255 209 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 IFNA21P01568 189 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 IGKV3-20P01619 116 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 ANXA3P12429 323 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 MEOX2P50222 304 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 EMP1P54849 157 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 PAX9P55771 341 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 ZNF90Q03938 601 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 IL18Q14116 193 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 GAMTQ14353 236 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 ZNF79Q15937 498 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 LYZL2Q7Z4W2 148 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 DIRAS2Q96HU8 199 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 SLC35E1Q96K37 410 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 LINC00052Q96N35 136 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 NIPSNAP3BQ9BS92 247 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 RBKSQ9H477 322 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 PRR13Q9NZ81 148 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 CCDC59Q9P031 241 aaKnown RBP5.43□□□□□ -1.54
NEK3-201ENST00000550331 GOLT1BQ9Y3E0 138 aa5.43□□□□□ -1.54
NEK3-201ENST00000550331 IGHV3OR16-12A0A075B7B8 117 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 DUXBA0A1W2PPF3 345 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 SCGB1D2O95969 90 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 CFDP00746 253 aaPredicted RBP5.42□□□□□ -1.54
NEK3-201ENST00000550331 HBE1P02100 147 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 AKR1C4P17516 323 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 ALDH3B2P48448 385 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 FXYD7P58549 80 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 DEFB1P60022 68 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 LYZP61626 148 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 PSG9Q00887 426 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 SPCS2Q15005 226 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 RNF212Q495C1 297 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 FAM222AQ5U5X8 452 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 EBLN2Q6P2I7 272 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 Q6ZR54 194 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 GPR141Q7Z602 305 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 ZNF575Q86XF7 245 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 UBE2DNLQ8IWF7 75 aa5.42□□□□□ -1.54
NEK3-201ENST00000550331 OR8I2Q8N0Y5 310 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms