RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 PFDN2Q9UHV9 154 aa13.17□□□□□ -0.3
TUBA1A-206ENST00000550254 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
TUBA1A-206ENST00000550254 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 C1orf194Q5T5A4 169 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 GSG1LQ6UXU4 331 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 CYP2G1PQ6ZSU1 146 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 NRARPQ7Z6K4 114 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 STHQ8IWL8 128 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 OR10P1Q8NGE3 313 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 SEPSECSQ9HD40 501 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-206ENST00000550254 A0A0J9YWU9 116 aa13.15□□□□□ -0.3
TUBA1A-206ENST00000550254 FNDC10F2Z333 226 aa13.15□□□□□ -0.3
TUBA1A-206ENST00000550254 EWSR1Q01844 656 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBA1A-206ENST00000550254 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
TUBA1A-206ENST00000550254 FBXL17Q9UF56 701 aa13.15□□□□□ -0.3
TUBA1A-206ENST00000550254 SLC45A2Q9UMX9 530 aa13.15□□□□□ -0.3
TUBA1A-206ENST00000550254 L7N2F9 121 aa13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 GIG44P09565 113 aaPredicted RBP13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 ORM2P19652 201 aa13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 VAMP2P63027 116 aa13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 ACTL10Q5JWF8 245 aa13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 DYNC2H1Q8NCM8 4307 aaKnown RBP13.14□□□□□ -0.31
TUBA1A-206ENST00000550254 ZNF98A6NK75 572 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 SOCS3O14543 225 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 OR8I2Q8N0Y5 310 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 OR1B1Q8NGR6 318 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 MGAT4CQ9UBM8 478 aa13.13□□□□□ -0.31
TUBA1A-206ENST00000550254 FAM24AA6NFZ4 105 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 DEDDO75618 318 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 PLP1P60201 277 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 RAB32Q13637 225 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 GGACTQ9BVM4 153 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 GPN1Q9HCN4 374 aaPredicted RBP13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 DOK5Q9P104 306 aa13.12□□□□□ -0.31
TUBA1A-206ENST00000550254 INMT-MINDY4F8WBC2 141 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 SPP1P10451 314 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 C4BPBP20851 252 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 BCAP31P51572 246 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 DEFB1P60022 68 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 SELENOTP62341 195 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 SLC38A11Q08AI6 406 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 RARRES2Q99969 163 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 TMEM147Q9BVK8 224 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 SACSQ9NZJ4 4579 aa13.11□□□□□ -0.31
TUBA1A-206ENST00000550254 H3BRN7 92 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 SIX6O95475 246 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 LINC00869P0C866 280 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 CAV2P51636 162 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 S100A10P60903 97 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 GDF5OSQ5U4N7 250 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 PATE2Q6UY27 113 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 SCRT1Q9BWW7 348 aa13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
TUBA1A-206ENST00000550254 H3BMM0 161 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 PRAF2O60831 178 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 CST7O76096 145 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 PVALBP20472 110 aaPredicted RBP13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 ID1P41134 155 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 PSMB3P49720 205 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 SHANK2-AS3Q9BTD1 123 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 LYRM2Q9NU23 88 aaPredicted RBP13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 HIGD1AQ9Y241 93 aa13.09□□□□□ -0.31
TUBA1A-206ENST00000550254 IGSF23A1L1A6 192 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 GOSR2O14653 212 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 AGPAT2O15120 278 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 HYPMO75409 117 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 HLA-DRB4P13762 266 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 GALR1P47211 349 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 DEFA1P59665 94 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 DEFA3P59666 94 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 RAP2BP61225 183 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 TMEM252Q8N6L7 170 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 UHRF2Q96PU4 802 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 MGST2Q99735 147 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 HLA-DRB4X5D2U9 266 aa13.08□□□□□ -0.32
TUBA1A-206ENST00000550254 ISLRO14498 428 aa13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 OR5G3P0C626 314 aa13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 TMEM41BQ5BJD5 291 aa13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 TMEM217Q8N7C4 229 aa13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 C20orf173Q96LM9 149 aa13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 GPR82Q96P67 336 aa13.07□□□□□ -0.32
TUBA1A-206ENST00000550254 ARL6Q9H0F7 186 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 312.8 ms