RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 NEU1Q99519 415 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 SAV1Q9H4B6 383 aaPredicted RBP7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 STRAPQ9Y3F4 350 aaKnown RBP7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 X6R8D5 127 aa7.88□□□□□ -1.15
VTI1BP3-201ENST00000550220 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 IFNA21P01568 189 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 HOXB5P09067 269 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 ID3Q02535 119 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF79Q15937 498 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 TRIQKQ629K1 86 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 BPIFCQ8NFQ6 507 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 OR4D5Q8NGN0 318 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 RNF126Q9BV68 326 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 CLEC5AQ9NY25 188 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 XCL2Q9UBD3 114 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 RNF24Q9Y225 148 aa7.87□□□□□ -1.15
VTI1BP3-201ENST00000550220 ELOA3CA0A087WX78 387 aaPredicted RBP7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 WRBO00258 174 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 NDUFB6O95139 128 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 OR2F1Q13607 317 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 SPANXN5Q5MJ07 72 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF705AQ6ZN79 300 aaPredicted RBP7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 TMEM144Q7Z5S9 345 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 OR1B1Q8NGR6 318 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 C7orf50Q9BRJ6 194 aaKnown RBP7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 TMEM147Q9BVK8 224 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 SRRQ9GZT4 340 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 RPRMQ9NS64 109 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 APLNQ9ULZ1 77 aa7.86□□□□□ -1.15
VTI1BP3-201ENST00000550220 KMT2AQ03164 3969 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 PRSS46E5RG02 174 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 SOCS3O14543 225 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 SPART-AS1P0CW21 52 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 PAX9P55771 341 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 PSG9Q00887 426 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 AKR1C1Q04828 323 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 RPP25LQ8N5L8 163 aaKnown RBP7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 C16orf92Q96LL3 132 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 WDR12Q9GZL7 423 aaKnown RBP7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 MAGT1Q9H0U3 335 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 GOLT1BQ9Y3E0 138 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 RFNGQ9Y644 331 aa7.85□□□□□ -1.15
VTI1BP3-201ENST00000550220 IGKV1OR2-108A0A075B7D4 117 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 DEFB131BA0A096LNP1 70 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF98A6NK75 572 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF705FA8MVS1 300 aaPredicted RBP7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 OR4E1P0C645 316 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF705DP0CH99 300 aaPredicted RBP7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 ZNF705BP0CI00 300 aaPredicted RBP7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 ORM2P19652 201 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 RAP2BP61225 183 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 SELENOTP62341 195 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 Q6ZTC4 211 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 OR4B1Q8NGF8 309 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 SMIM8Q96KF7 97 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 FAM210BQ96KR6 192 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 RSG1Q9BU20 258 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 RBM38Q9H0Z9 239 aaKnown RBP7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 PSENENQ9NZ42 101 aa7.84□□□□□ -1.15
VTI1BP3-201ENST00000550220 AGRNO00468 2067 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 IGHV4-4A0A075B6R2 117 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 A0A0J9YX75 114 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 FNDC10F2Z333 226 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 DEDDO75618 318 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 DUSP14O95147 198 aaKnown RBP7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 AMBPP02760 352 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 IL5P05113 134 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 RPL7P18124 248 aaKnown RBP7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 TAS2R30P59541 319 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 C12orf74Q32Q52 190 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 C4orf46Q504U0 113 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 NDUFAF3Q9BU61 184 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 SLC25A22Q9H936 323 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 DOK5Q9P104 306 aa7.83□□□□□ -1.16
VTI1BP3-201ENST00000550220 SMCO3A2RU48 225 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 HYPMO75409 117 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 HBE1P02100 147 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 P0DMU3 169 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 FAM231AP0DMU4 169 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 FAM231CP0DMU5 169 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 B2MP61769 119 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 POLR2GP62487 172 aaKnown RBP eCLIP7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 DLK1P80370 383 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 BAK1Q16611 211 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 PXDC1Q5TGL8 231 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 GDF5OSQ5U4N7 250 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 FAM78BQ5VT40 261 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 ACOT7LQ6ZUV0 252 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 ZNF709Q8N972 641 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 OR10P1Q8NGE3 313 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 SLC25A32Q9H2D1 315 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 NPVFQ9HCQ7 196 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 NDUFA13Q9P0J0 144 aa7.82□□□□□ -1.16
VTI1BP3-201ENST00000550220 H3BP45 60 aa7.81□□□□□ -1.16
VTI1BP3-201ENST00000550220 ADAP1O75689 374 aa7.81□□□□□ -1.16
VTI1BP3-201ENST00000550220 PLP1P60201 277 aa7.81□□□□□ -1.16
VTI1BP3-201ENST00000550220 OXA1LQ15070 435 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms