RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 STAB1Q9NY15 2570 aa7.49□□□□□ -1.21
SMARCD1-206ENST00000549274 UMAD1C9J7I0 102 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 CXCL2P19875 107 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 SLURP1P55000 103 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 LYZP61626 148 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 PRR20EP86478 221 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 PRR20CP86479 221 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 PRR20DP86480 221 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 PRR20BP86481 221 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 PRR20AP86496 221 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 ZNF90Q03938 601 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 PRR31Q5SQ13 230 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 C1orf194Q5T5A4 169 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 C9orf66Q5T8R8 295 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 SAMD13Q5VXD3 122 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 DYNLRB2Q8TF09 96 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 SLC39A9Q9NUM3 307 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 TECRQ9NZ01 308 aaKnown RBP7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 HIGD1AQ9Y241 93 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 TENM1Q9UKZ4 2725 aa7.48□□□□□ -1.21
SMARCD1-206ENST00000549274 SEC11BP0C7V7 166 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 M6PRP20645 277 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 CRYBB3P26998 211 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 MEOX2P50222 304 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 RAB5CP51148 216 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 TAS2R45P59539 299 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 LGALSLQ3ZCW2 172 aaPredicted RBP7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 AKR1C8PQ5T2L2 129 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 RPL7L1Q6DKI1 246 aaKnown RBP7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 LAMTOR1Q6IAA8 161 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 BAP18Q8IXM2 172 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 C9orf62Q8N4C0 152 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 STXBP6Q8NFX7 210 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 OR1B1Q8NGR6 318 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 PHYHIPLQ96FC7 376 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 PBDC1Q9BVG4 233 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 MRPL32Q9BYC8 188 aaKnown RBP7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 ARV1Q9H2C2 271 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 DNAJC4Q9NNZ3 241 aa7.47□□□□□ -1.21
SMARCD1-206ENST00000549274 TRAV25A0A0B4J276 109 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 IGHV3-35A0A0C4DH35 117 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 IGHV7-4-1A0A0J9YVY3 117 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 A0A1W2PPV4 95 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 HELTA6NFD8 242 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 C2orf70A6NJV1 201 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 OR5G3P0C626 314 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 C8orf88P0DMB2 117 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 ORM2P19652 201 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 ATP6V0CP27449 155 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 RHOBP62745 196 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 PAFAH1B2P68402 229 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 FFAR4Q5NUL3 377 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 C10orf113Q5VZT2 155 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 DPPA3Q6W0C5 159 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 HSD17B11Q8NBQ5 300 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 WFDC1Q9HC57 220 aa7.46□□□□□ -1.22
SMARCD1-206ENST00000549274 TMEM213A2RRL7 107 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 SEC14L6B5MCN3 397 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 TEX46H3BTG2 121 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 SPP1P10451 314 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 RPL7P18124 248 aaKnown RBP7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 CBLN1P23435 193 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 GALR1P47211 349 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 MIC13Q5XKP0 118 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 LCN12Q6JVE5 192 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 UNQ9165/PRO28630Q6UXU0 137 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 DUX3Q96PT4 197 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 SLC25A32Q9H2D1 315 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 CYTL1Q9NRR1 136 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 SMPXQ9UHP9 88 aa7.45□□□□□ -1.22
SMARCD1-206ENST00000549274 SAP30O75446 220 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 FOLR2P14207 255 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 CD300CQ08708 224 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 USF2Q15853 346 aaPredicted RBP7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 KHDC3LQ587J8 217 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 TMEM41BQ5BJD5 291 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 LINC00305Q7Z4B0 112 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 BPIFA4PQ86YQ2 179 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 OR8I2Q8N0Y5 310 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 LRRC20Q8TCA0 184 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 ST8SIA2Q92186 375 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 SHANK2-AS3Q9BTD1 123 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 RHPN1-AS1Q9BWJ2 59 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 ACTR3CQ9C0K3 210 aaPredicted RBP7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 VSIRQ9H7M9 311 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 CLEC5AQ9NY25 188 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 U3KQE9 123 aa7.44□□□□□ -1.22
SMARCD1-206ENST00000549274 TRAV2A0A0B4J234 112 aa7.43□□□□□ -1.22
SMARCD1-206ENST00000549274 ZNF98A6NK75 572 aa7.43□□□□□ -1.22
SMARCD1-206ENST00000549274 H3BRN7 92 aa7.43□□□□□ -1.22
SMARCD1-206ENST00000549274 CHEK1O14757 476 aa7.43□□□□□ -1.22
SMARCD1-206ENST00000549274 WIPF1O43516 503 aa7.43□□□□□ -1.22
SMARCD1-206ENST00000549274 BUB3O43684 328 aa7.43□□□□□ -1.22
SMARCD1-206ENST00000549274 CSN3P07498 182 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms