RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 G6PCP35575 357 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 HBG1P69891 147 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 HBG2P69892 147 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 RPP30P78346 268 aaKnown RBP9.85□□□□□ -0.83
CDX2-202ENST00000548877 ZNF124Q15973 351 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 POU2AF1Q16633 256 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 Q8NAQ8 132 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 OR52E5Q8NH55 327 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 OR4A16Q8NH70 328 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 CYTL1Q9NRR1 136 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 PFDN2Q9UHV9 154 aa9.85□□□□□ -0.83
CDX2-202ENST00000548877 RPS10-NUDT3A0A1W2PQS6 291 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 F8W735 103 aaPredicted RBP9.84□□□□□ -0.83
CDX2-202ENST00000548877 AARDQ4LEZ3 155 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 Q6ZRM9 215 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 SLC7A5P1Q8MH63 180 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 TMEM252Q8N6L7 170 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 OR1S2Q8NGQ3 325 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 RNF141Q8WVD5 230 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 FAM210AQ96ND0 272 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 MAGT1Q9H0U3 335 aa9.84□□□□□ -0.83
CDX2-202ENST00000548877 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 OR2T8A6NH00 312 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 C15orf61A6NNL5 157 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 DEFB4AO15263 64 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 CYB5BO43169 146 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 SULT1A1P50225 295 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 RAB5CP51148 216 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 SPCS3P61009 180 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 RNF2Q99496 336 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 CHRDL1Q9BU40 450 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 ARV1Q9H2C2 271 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 FKBP11Q9NYL4 201 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 PSENENQ9NZ42 101 aa9.83□□□□□ -0.84
CDX2-202ENST00000548877 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 FAM24AA6NFZ4 105 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 UPK2O00526 184 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 CHEK1O14757 476 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 CA1P00915 261 aaPredicted RBP9.82□□□□□ -0.84
CDX2-202ENST00000548877 NMBP08949 121 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 SEC11BP0C7V7 166 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 RPL7L1Q6DKI1 246 aaKnown RBP9.82□□□□□ -0.84
CDX2-202ENST00000548877 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 HSD17B13Q7Z5P4 300 aaPredicted RBP9.82□□□□□ -0.84
CDX2-202ENST00000548877 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 GNPNAT1Q96EK6 184 aaPredicted RBP9.82□□□□□ -0.84
CDX2-202ENST00000548877 SAT2Q96F10 170 aaPredicted RBP9.82□□□□□ -0.84
CDX2-202ENST00000548877 PRNDQ9UKY0 176 aa9.82□□□□□ -0.84
CDX2-202ENST00000548877 IGHV7-4-1A0A0J9YVY3 117 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 IGSF23A1L1A6 192 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 CEBPZOSA8MTT3 80 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 IFNA5P01569 189 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 IFNA17P01571 189 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 AMBPP02760 352 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
CDX2-202ENST00000548877 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 PAX9P55771 341 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 BLOC1S1P78537 153 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
CDX2-202ENST00000548877 ATP6V1FQ16864 119 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 ATP5SQ99766 215 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 GINS3Q9BRX5 216 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 C20orf24Q9BUV8 137 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 QTRT1Q9BXR0 403 aaKnown RBP9.81□□□□□ -0.84
CDX2-202ENST00000548877 COMMD5Q9GZQ3 224 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 RBKSQ9H477 322 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 TMEM140Q9NV12 185 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 C21orf62Q9NYP8 219 aa9.81□□□□□ -0.84
CDX2-202ENST00000548877 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
CDX2-202ENST00000548877 TRAV3A0A0B4J244 114 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 CD5P06127 495 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 CTSGP08311 255 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
CDX2-202ENST00000548877 P0DMU3 169 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 MIFP14174 115 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 ATP5IP56385 69 aaPredicted RBP9.8□□□□□ -0.84
CDX2-202ENST00000548877 NHLH2Q02577 135 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 WT1-ASQ06250 92 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 Q6ZTC4 211 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 COMMD7Q86VX2 200 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 TMEM116Q8NCL8 245 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 OR5C1Q8NGR4 320 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 TMED6Q8WW62 240 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 PINX1Q96BK5 328 aaKnown RBP9.8□□□□□ -0.84
CDX2-202ENST00000548877 SMIM3Q9BZL3 60 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 ENY2Q9NPA8 101 aa9.8□□□□□ -0.84
CDX2-202ENST00000548877 TRAV2A0A0B4J234 112 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 ZNF705EA8MWA4 302 aaPredicted RBP9.79□□□□□ -0.84
CDX2-202ENST00000548877 UMAD1C9J7I0 102 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms