RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SOHLH1Q5JUK2 328 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 Q6ZR54 194 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 TRIM63Q969Q1 353 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 NEU1Q99519 415 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 WDR12Q9GZL7 423 aaKnown RBP8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 RFNGQ9Y644 331 aa8.5□□□□□ -1.05
TRAFD1-205ENST00000548277 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 TMEM189A5PLL7 270 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 SMIM9A6NGZ8 99 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF705FA8MVS1 300 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 TOMM40O96008 361 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF705DP0CH99 300 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF705BP0CI00 300 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 S100A5P33763 92 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 NKX2-1P43699 371 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 AP3S2P59780 193 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 TMEM128Q5BJH2 165 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 TMEM88Q6PEY1 159 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 SAV1Q9H4B6 383 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 YTHDF2Q9Y5A9 579 aaKnown RBP8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 V9GYH0 126 aa8.49□□□□□ -1.05
TRAFD1-205ENST00000548277 PKD1P98161 4303 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 LOC102723971A0A1B0GUV8 181 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 PRM2P04554 102 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 VAMP1P23763 118 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 TNP2Q05952 138 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 GAMTQ14353 236 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF79Q15937 498 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 C1orf158Q8N1D5 194 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 COQ8AQ8NI60 647 aa8.48□□□□□ -1.05
TRAFD1-205ENST00000548277 PIGBOS1A0A0B4J2F0 54 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 DUXBA0A1W2PPF3 345 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 ZFP92A6NM28 416 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 PITX3O75364 302 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 HBE1P02100 147 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 IAPPP10997 89 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 GPX4P36969 197 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 ID1P41134 155 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 ATP5IP56385 69 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 LYZP61626 148 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 DAD1P61803 113 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF90Q03938 601 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 OR2F1Q13607 317 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 FAM78BQ5VT40 261 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 CCDC190Q86UF4 302 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 ZNF709Q8N972 641 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 PPP1R14BQ96C90 147 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 RNF125Q96EQ8 232 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 SLC35E1Q96K37 410 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 SLC25A21Q9BQT8 299 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 MAGT1Q9H0U3 335 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 SEPSECSQ9HD40 501 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 PAIP2BQ9ULR5 123 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 GOLT1BQ9Y3E0 138 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 TMED3Q9Y3Q3 217 aa8.47□□□□□ -1.05
TRAFD1-205ENST00000548277 IGKV1D-37A0A075B6S9 117 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 C16orf90A8MZG2 172 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 SFT2D2O95562 160 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 PSG9Q00887 426 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 RRN3P1Q2M238 152 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 RNF212Q495C1 297 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 FOXI2Q6ZQN5 318 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 LRTM2Q8N967 370 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 FAM210BQ96KR6 192 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 TMEM208Q9BTX3 173 aa8.46□□□□□ -1.06
TRAFD1-205ENST00000548277 ZNF705GA8MUZ8 300 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-205ENST00000548277 HOXB5P09067 269 aa8.45□□□□□ -1.06
TRAFD1-205ENST00000548277 SLC25A6P12236 298 aa8.45□□□□□ -1.06
TRAFD1-205ENST00000548277 RAB11AP62491 216 aa8.45□□□□□ -1.06
TRAFD1-205ENST00000548277 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
TRAFD1-205ENST00000548277 DEDD2Q8WXF8 326 aa8.45□□□□□ -1.06
TRAFD1-205ENST00000548277 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 SNRPGP15A8MWD9 76 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 WRBO00258 174 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 SYNGR2O43760 224 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 MED6O75586 246 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 NUDT3O95989 172 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 FABP1P07148 127 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 DEFB130BP0DP73 79 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 DEFB130AP0DP74 79 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 FCN2Q15485 313 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 SPANXN2Q5MJ10 180 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 OR8G2PQ6IF36 304 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 OR8I2Q8N0Y5 310 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 C16orf92Q96LL3 132 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 C20orf173Q96LM9 149 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 RBM38Q9H0Z9 239 aaKnown RBP8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
TRAFD1-205ENST00000548277 A0A0J9YX75 114 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 SOCS3O14543 225 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 NUP62P37198 522 aaPredicted RBP8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 INPP1P49441 399 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 PSMB3P49720 205 aa8.43□□□□□ -1.06
TRAFD1-205ENST00000548277 OXA1LQ15070 435 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms