RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 RPRMQ9NS64 109 aa9.34□□□□□ -0.91
CCDC59-202ENST00000547758 C3orf85A0A1B0GTC6 90 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 CBY3A6NI87 242 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 INSP01308 110 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 SAMD12Q8N8I0 201 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 TMEM170AQ8WVE7 144 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
CCDC59-202ENST00000547758 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
CCDC59-202ENST00000547758 ELK1P19419 428 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 B2MP61769 119 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 SP6Q3SY56 376 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 C1orf194Q5T5A4 169 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 ZNF586Q9NXT0 402 aa9.32□□□□□ -0.92
CCDC59-202ENST00000547758 M0R2Z0 102 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 AZU1P20160 251 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 UCP1P25874 307 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC59-202ENST00000547758 CROCCP3Q8IVE0 287 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 FAM219AQ8IW50 185 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 OR11H7Q8NGC8 314 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 C16orf92Q96LL3 132 aa9.31□□□□□ -0.92
CCDC59-202ENST00000547758 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.31□□□□□ -0.92
CCDC59-202ENST00000547758 A6NHS1 94 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 CEBPZOSA8MTT3 80 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 MEOX2P50222 304 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 LINC00315P59091 139 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 LYZP61626 148 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 CDPF1Q6NVV7 123 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 IZUMO2Q6UXV1 221 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
CCDC59-202ENST00000547758 NOXA1Q86UR1 476 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 LHFPL1Q86WI0 220 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 BAP18Q8IXM2 172 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 OR8I2Q8N0Y5 310 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 GNPNAT1Q96EK6 184 aaPredicted RBP9.3□□□□□ -0.92
CCDC59-202ENST00000547758 COPZ2Q9P299 210 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 UBR4Q5T4S7 5183 aa9.3□□□□□ -0.92
CCDC59-202ENST00000547758 TRAV26-1A0A087WT03 109 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 ZFP92A6NM28 416 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 EREGO14944 169 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 CNN1P51911 297 aaKnown RBP9.29□□□□□ -0.92
CCDC59-202ENST00000547758 ZNF90Q03938 601 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 KLF9Q13886 244 aaPredicted RBP9.29□□□□□ -0.92
CCDC59-202ENST00000547758 ESRGQ1W209 222 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 NMSQ5H8A3 153 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 SNX29P2Q8IUI4 249 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 PPP1R14BQ96C90 147 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 ZNF503Q96F45 646 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 VCX3BQ9H321 246 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 MDFICQ9P1T7 246 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 CACNG5Q9UF02 275 aa9.29□□□□□ -0.92
CCDC59-202ENST00000547758 MRPS16Q9Y3D3 137 aaKnown RBP9.29□□□□□ -0.92
CCDC59-202ENST00000547758 B3GALNT1O75752 331 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
CCDC59-202ENST00000547758 M6PRP20645 277 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 TGFBR1P36897 503 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 OR5I1Q13606 314 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 LCE1DQ5T752 114 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 GPR141Q7Z602 305 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 ARRDC1Q8N5I2 433 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 C16orf74Q96GX8 76 aa9.28□□□□□ -0.92
CCDC59-202ENST00000547758 TIMM8BQ9Y5J9 83 aaPredicted RBP9.28□□□□□ -0.92
CCDC59-202ENST00000547758 IGKV1D-37A0A075B6S9 117 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 A0A0J9YY99 117 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 CDS2O95674 445 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 SMR3BP02814 79 aaPredicted RBP9.27□□□□□ -0.93
CCDC59-202ENST00000547758 GALR1P47211 349 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 ERVFC1-1P60608 527 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 OR10J6PQ8NGY7 276 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 LHFPL5Q8TAF8 219 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 C17orf77Q96MU5 243 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 LINC01587Q99440 93 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 TMEM222Q9H0R3 208 aa9.27□□□□□ -0.93
CCDC59-202ENST00000547758 FABP1P07148 127 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 OR5AC1P0C628 307 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 HTN1P15515 57 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 RPS19P39019 145 aaKnown RBP9.26□□□□□ -0.93
CCDC59-202ENST00000547758 TAS2R60P59551 318 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 KRTAP10-1P60331 282 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 ICAM4Q14773 271 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 RNASE10Q5GAN6 216 aaKnown RBP9.26□□□□□ -0.93
CCDC59-202ENST00000547758 TMEM256Q8N2U0 113 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 OR13C8Q8NGS7 320 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 ZFAND1Q8TCF1 268 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 RBPMSQ93062 196 aaKnown RBP9.26□□□□□ -0.93
CCDC59-202ENST00000547758 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 SLC25A32Q9H2D1 315 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
CCDC59-202ENST00000547758 RAB26Q9ULW5 256 aa9.26□□□□□ -0.93
CCDC59-202ENST00000547758 SMIM31A0A1B0GVY4 71 aa9.25□□□□□ -0.93
CCDC59-202ENST00000547758 SNRPGP15A8MWD9 76 aa9.25□□□□□ -0.93
CCDC59-202ENST00000547758 ANKRD65E5RJM6 399 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms