RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 AP4M1O00189 453 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 FABP9Q0Z7S8 132 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 KRTAP24-1Q3LI83 254 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 OR5AU1Q8NGC0 362 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 WNT10AQ9GZT5 417 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 ZNF355PQ9NSJ1 428 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 A0A1W2PRE2 83 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 BRD3OSQ6XYD6 125 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 ELOVL1Q9BW60 279 aa13.05□□□□□ -0.32
CHMP1A-204ENST00000547687 PPP1R2P9O14990 202 aa13.04□□□□□ -0.32
CHMP1A-204ENST00000547687 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
CHMP1A-204ENST00000547687 UBE2L3P68036 154 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-204ENST00000547687 EBI3Q14213 229 aa13.04□□□□□ -0.32
CHMP1A-204ENST00000547687 FXYD3Q14802 87 aa13.04□□□□□ -0.32
CHMP1A-204ENST00000547687 ORM2P19652 201 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 CRYBB3P26998 211 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 C5orf64Q2M2E5 130 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 Q8N6K4 173 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 PAXXQ9BUH6 204 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 ANK2Q01484 3957 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 MDFIC2A0A1B0GVS7 189 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 LINC00587B1AMM8 73 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 GGTLC3B5MD39 225 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 I3L2K1 104 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 OR1B1Q8NGR6 318 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 SFRP2Q96HF1 295 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
CHMP1A-204ENST00000547687 HELTA6NFD8 242 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 C9JCJ5 164 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 PYYP10082 97 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 TMEM11P17152 192 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 GATA3P23771 443 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 MEOX2P50222 304 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 SRD5A3Q9H8P0 318 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 LY96Q9Y6Y9 160 aa13.02□□□□□ -0.33
CHMP1A-204ENST00000547687 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 FAM106CPP0CH98 169 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 BRS3P32247 399 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 NDUFA6P56556 154 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 FAM103A1Q9BTL3 118 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BKO60814 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 GGCTO75223 188 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HYPMO75409 117 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BJP06899 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BOP23527 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BBP33778 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BDP58876 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BCP62807 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST2H2BEQ16778 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 OR1L6Q8NGR2 347 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BHQ93079 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BNQ99877 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 HIST1H2BMQ99879 126 aa13.01□□□□□ -0.33
CHMP1A-204ENST00000547687 A0A0U1RQK1 487 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 PPP5D1E7EU14 171 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 J3QLI3 93 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 TCF21O43680 179 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 KLF17Q5JT82 389 aaPredicted RBP13□□□□□ -0.33
CHMP1A-204ENST00000547687 ZNF562Q6V9R5 426 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 OR10G8Q8NGN5 311 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 FRZBQ92765 325 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 IMMP2LQ96T52 175 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 SOX21Q9Y651 276 aaPredicted RBP13□□□□□ -0.33
CHMP1A-204ENST00000547687 K7EN84 100 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 TRGC1P0CF51 173 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 IGLC1P0CG04 106 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 PLP1P60201 277 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 TEX38Q6PEX7 206 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 FXYD5Q96DB9 178 aa13□□□□□ -0.33
CHMP1A-204ENST00000547687 PHOX2AO14813 284 aa12.99□□□□□ -0.33
CHMP1A-204ENST00000547687 HOXA5P20719 270 aa12.99□□□□□ -0.33
CHMP1A-204ENST00000547687 GNG4P50150 75 aa12.99□□□□□ -0.33
CHMP1A-204ENST00000547687 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-204ENST00000547687 CX3CL1P78423 397 aa12.99□□□□□ -0.33
CHMP1A-204ENST00000547687 K7EIM0 57 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 PSG1P11464 419 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 FOXL1Q12952 345 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 TIGITQ495A1 244 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 CENPWQ5EE01 88 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 RASL11BQ9BPW5 248 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 Q8N9W7 124 aa12.98□□□□□ -0.33
CHMP1A-204ENST00000547687 FSHBP01225 129 aa12.97□□□□□ -0.33
CHMP1A-204ENST00000547687 S100A8P05109 93 aa12.97□□□□□ -0.33
CHMP1A-204ENST00000547687 SGMS2Q8NHU3 365 aa12.97□□□□□ -0.33
CHMP1A-204ENST00000547687 MEGF9Q9H1U4 602 aa12.97□□□□□ -0.33
CHMP1A-204ENST00000547687 NPIPB5A8MRT5 1133 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms