RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 EFNA4P52798 201 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 FADDQ13158 208 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 SPA17Q15506 151 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 LIN52Q52LA3 116 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 AKIRIN2Q53H80 203 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 FAM74A1Q5RGS3 127 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 KRTAP26-1Q6PEX3 210 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 LINC00322Q6ZN03 302 aaPredicted RBP0.36□□□□□ -2.35
CCDC38-204ENST00000546816 ST6GALNAC3Q8NDV1 305 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 MNS1Q8NEH6 495 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 OR2T35Q8NGX2 323 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 YPEL2Q96QA6 119 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 IMUPQ9GZP8 106 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 E9PCH4 1651 aa0.36□□□□□ -2.35
CCDC38-204ENST00000546816 FSIP2Q5CZC0 6907 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 IGHV1-58A0A0C4DH39 117 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 DNAL4O96015 105 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 ZNF833PQ6ZTB9 187 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 GOLT1AQ6ZVE7 132 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 GRINAQ7Z429 371 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 OR10K1Q8NGX5 313 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 LINC00052Q96N35 136 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 TP53RKQ96S44 253 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 TAS2R7Q9NYW3 318 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 ORMDL1Q9P0S3 153 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 PCF11O94913 1555 aaKnown RBP0.35□□□□□ -2.35
CCDC38-204ENST00000546816 CNTRLQ7Z7A1 2325 aa0.35□□□□□ -2.35
CCDC38-204ENST00000546816 SCN10AQ9Y5Y9 1956 aa0.34□□□□□ -2.35
CCDC38-204ENST00000546816 A0A1W2PPM0 123 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 TLCD2A6NGC4 264 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 B4DSR2 109 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 E7EUB6 86 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 M0R378 163 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 TAX1BP3O14907 124 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 KDM6AO15550 1401 aaPredicted RBP0.34□□□□□ -2.36
CCDC38-204ENST00000546816 NDUFB3O43676 98 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 C1QBP02746 253 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 HOXA6P31267 233 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 DSCR4P56555 118 aaPredicted RBP0.34□□□□□ -2.36
CCDC38-204ENST00000546816 DOCK3Q8IZD9 2030 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 OR10X1Q8NGY0 326 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 SLC25A21Q9BQT8 299 aaPredicted RBP0.34□□□□□ -2.36
CCDC38-204ENST00000546816 TMEM14CQ9P0S9 112 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 KIAA1549Q9HCM3 1950 aa0.34□□□□□ -2.36
CCDC38-204ENST00000546816 ARHGEF11O15085 1522 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 SCN3AQ9NY46 2000 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 A0A087WSZ3 146 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 TRAV10A0A0B4J240 114 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 E2F6O75461 281 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 KLF7O75840 302 aaPredicted RBP0.33□□□□□ -2.36
CCDC38-204ENST00000546816 IFNA7P01567 189 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 IFNA6P05013 189 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 S100A6P06703 90 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 HSPE1P61604 102 aaKnown RBP0.33□□□□□ -2.36
CCDC38-204ENST00000546816 BCL2L15Q5TBC7 163 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 C2orf82Q6UX34 121 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 C4orf22Q6V702 233 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 GKN2Q86XP6 184 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 PLPP5Q8NEB5 264 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 CANT1Q8WVQ1 401 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 TEX37Q96LM6 180 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 LYSMD1Q96S90 227 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 ENY2Q9NPA8 101 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 PCTPQ9UKL6 214 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 FAM32AQ9Y421 112 aaKnown RBP0.33□□□□□ -2.36
CCDC38-204ENST00000546816 LY96Q9Y6Y9 160 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 KIF1BO60333 1816 aa0.33□□□□□ -2.36
CCDC38-204ENST00000546816 ADGRL3Q9HAR2 1447 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 GGCTO75223 188 aaKnown RBP0.32□□□□□ -2.36
CCDC38-204ENST00000546816 UBE2BP63146 152 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 REEP5Q00765 189 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 MYL5Q02045 173 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 OR5D14Q8NGL3 314 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 C9orf16Q9BUW7 83 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 OPTCQ9UBM4 332 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 ARL2BPQ9Y2Y0 163 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 CECR2Q9BXF3 1484 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 OBSL1O75147 1896 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 ZFC3H1O60293 1989 aaKnown RBP0.32□□□□□ -2.36
CCDC38-204ENST00000546816 EML5Q05BV3 1969 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 RFX7Q2KHR2 1363 aa0.32□□□□□ -2.36
CCDC38-204ENST00000546816 IGLV3-32A0A0A0MS00 114 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 TMEM210A6NLX4 147 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 TMEM256-PLSCR3K7ERE1 68 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 HMGB3O15347 200 aaKnown RBP0.31□□□□□ -2.36
CCDC38-204ENST00000546816 SERPINA1P01009 418 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 IGLV1-51P01701 117 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 CD2P06729 351 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 HLA-EP13747 358 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 HSD11B1P28845 292 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 CAPZBP47756 277 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 TAF1AQ15573 450 aaPredicted RBP0.31□□□□□ -2.36
CCDC38-204ENST00000546816 C1orf134Q5TEV5 83 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 HAGHLQ6PII5 290 aaPredicted RBP0.31□□□□□ -2.36
CCDC38-204ENST00000546816 PATE2Q6UY27 113 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 Q8TAT8 98 aa0.31□□□□□ -2.36
CCDC38-204ENST00000546816 DGCR14Q96DF8 476 aaKnown RBP0.31□□□□□ -2.36
CCDC38-204ENST00000546816 CCDC94Q9BW85 323 aaPredicted RBP0.31□□□□□ -2.36
CCDC38-204ENST00000546816 NPCDR1Q9BY65 106 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms