RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 AGPAT2O15120 278 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 LINC00869P0C866 280 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 ORM2P19652 201 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 RAP2BP61225 183 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 NHLH2Q02577 135 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 PXDC1Q5TGL8 231 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 S100A7AQ86SG5 101 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 PPP1R14BQ96C90 147 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 MS4A6AQ9H2W1 248 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 TUBA4BQ9H853 241 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
CCDC38-203ENST00000546803 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 HYPMO75409 117 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 CAMLGP49069 296 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 OR5C1Q8NGR4 320 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 OR1B1Q8NGR6 318 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 MGST2Q99735 147 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 FBXL17Q9UF56 701 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 SORL1Q92673 2214 aa12.56□□□□□ -0.4
CCDC38-203ENST00000546803 UBE2L5PA0A1B0GUS4 154 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 MPDU1O75352 247 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
CCDC38-203ENST00000546803 TFPI2P48307 235 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 STPG3Q8N7X2 389 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 HSPB11Q9Y547 144 aa12.55□□□□□ -0.4
CCDC38-203ENST00000546803 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 WFDC3Q8IUB2 231 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 STXBP6Q8NFX7 210 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 GGTLC1Q9BX51 225 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 RNF24Q9Y225 148 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 HIGD1AQ9Y241 93 aa12.54□□□□□ -0.4
CCDC38-203ENST00000546803 ZNF98A6NK75 572 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 K7EQG2 157 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 OR5G3P0C626 314 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 FGF7P21781 194 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
CCDC38-203ENST00000546803 CLINT1Q14677 625 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 OR8I2Q8N0Y5 310 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 ARL6Q9H0F7 186 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 DOK5Q9P104 306 aa12.53□□□□□ -0.4
CCDC38-203ENST00000546803 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.41
CCDC38-203ENST00000546803 NHLRC4P0CG21 123 aaPredicted RBP12.52□□□□□ -0.41
CCDC38-203ENST00000546803 PRR20EP86478 221 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 PRR20CP86479 221 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 PRR20DP86480 221 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 PRR20BP86481 221 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 PRR20AP86496 221 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 OPCMLQ14982 345 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 Q6ZRG5 221 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 GPR82Q96P67 336 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 ATP5SQ99766 215 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 SHANK2-AS3Q9BTD1 123 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 SLC25A39Q9BZJ4 359 aaPredicted RBP12.52□□□□□ -0.41
CCDC38-203ENST00000546803 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 UBQLN2Q9UHD9 624 aa12.52□□□□□ -0.41
CCDC38-203ENST00000546803 H3BRN7 92 aa12.51□□□□□ -0.41
CCDC38-203ENST00000546803 GALR1P47211 349 aa12.51□□□□□ -0.41
CCDC38-203ENST00000546803 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
CCDC38-203ENST00000546803 OR2T35Q8NGX2 323 aa12.51□□□□□ -0.41
CCDC38-203ENST00000546803 WDR61Q9GZS3 305 aaKnown RBP12.51□□□□□ -0.41
CCDC38-203ENST00000546803 ARV1Q9H2C2 271 aa12.51□□□□□ -0.41
CCDC38-203ENST00000546803 SEPSECSQ9HD40 501 aaKnown RBP12.51□□□□□ -0.41
CCDC38-203ENST00000546803 COX7A2P2O60397 106 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 B2MP61769 119 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 Q5BKY6 102 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 LINC00322Q6ZN03 302 aaPredicted RBP12.5□□□□□ -0.41
CCDC38-203ENST00000546803 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 SCRT1Q9BWW7 348 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 DNAJC4Q9NNZ3 241 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 KCNIP2Q9NS61 270 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 PXMP4Q9Y6I8 212 aa12.5□□□□□ -0.41
CCDC38-203ENST00000546803 DNAH3Q8TD57 4116 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
CCDC38-203ENST00000546803 RBMY1EA6NEQ0 496 aaKnown RBP12.49□□□□□ -0.41
CCDC38-203ENST00000546803 IFNA5P01569 189 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 RBMY1DP0C7P1 496 aaKnown RBP12.49□□□□□ -0.41
CCDC38-203ENST00000546803 RPL7P18124 248 aaKnown RBP12.49□□□□□ -0.41
CCDC38-203ENST00000546803 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 SCGB1C1Q8TD33 95 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 PFDN5Q99471 154 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 SLC25A32Q9H2D1 315 aa12.49□□□□□ -0.41
CCDC38-203ENST00000546803 MEOX2P50222 304 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 DEFB131AP59861 70 aa12.48□□□□□ -0.41
CCDC38-203ENST00000546803 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms