RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 RCVRNP35243 200 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
SCAF11-208ENST00000546534 OR8G2PQ6IF36 304 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 ETFRF1Q6IPR1 90 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 IZUMO2Q6UXV1 221 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 SLC24A4Q8NFF2 622 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 OR52E5Q8NH55 327 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 RNASE11Q8TAA1 199 aaKnown RBP8.83□□□□□ -1
SCAF11-208ENST00000546534 FRZBQ92765 325 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 ZNF486Q96H40 463 aaPredicted RBP8.83□□□□□ -1
SCAF11-208ENST00000546534 C20orf173Q96LM9 149 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 RPRMQ9NS64 109 aa8.83□□□□□ -1
SCAF11-208ENST00000546534 MYCBP2O75592 4640 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 FAT1Q14517 4588 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 ANKRD65E5RJM6 399 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 M0R2Z0 102 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
SCAF11-208ENST00000546534 UCP1P25874 307 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 SUPT4H1P63272 117 aaKnown RBP8.82□□□□□ -1
SCAF11-208ENST00000546534 C1orf194Q5T5A4 169 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 KRTAP4-12Q9BQ66 201 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.82□□□□□ -1
SCAF11-208ENST00000546534 ZNF586Q9NXT0 402 aa8.82□□□□□ -1
SCAF11-208ENST00000546534 A0A1W2PPQ1 181 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 CEBPZOSA8MTT3 80 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 INSP01308 110 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 TGFBR1P36897 503 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 SPINK13Q1W4C9 94 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 LHFPL1Q86WI0 220 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 SNX29P2Q8IUI4 249 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 BAP18Q8IXM2 172 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 OR11H7Q8NGC8 314 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 C18orf15Q96N68 181 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 MDFICQ9P1T7 246 aa8.81□□□□□ -1
SCAF11-208ENST00000546534 CNN1P51911 297 aaKnown RBP8.8□□□□□ -1
SCAF11-208ENST00000546534 B2MP61769 119 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 ZNF90Q03938 601 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 KLF9Q13886 244 aaPredicted RBP8.8□□□□□ -1
SCAF11-208ENST00000546534 Q6ZRN7 208 aaPredicted RBP8.8□□□□□ -1
SCAF11-208ENST00000546534 CROCCP3Q8IVE0 287 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 FAM219AQ8IW50 185 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 OR8I2Q8N0Y5 310 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 C16orf92Q96LL3 132 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 UPK3BQ9BT76 320 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 KRTAP9-9Q9BYP9 154 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 KRTAP9-4Q9BYQ2 154 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 PTTG2Q9NZH5 202 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 COPZ2Q9P299 210 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 CACNG5Q9UF02 275 aa8.8□□□□□ -1
SCAF11-208ENST00000546534 IGKV1D-37A0A075B6S9 117 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 RPS19P39019 145 aaKnown RBP8.79□□□□□ -1
SCAF11-208ENST00000546534 LINC00315P59091 139 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 LYZP61626 148 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 ESRGQ1W209 222 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 NMSQ5H8A3 153 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 LHFPL5Q8TAF8 219 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 PPP1R14BQ96C90 147 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 GNPNAT1Q96EK6 184 aaPredicted RBP8.79□□□□□ -1
SCAF11-208ENST00000546534 C17orf77Q96MU5 243 aa8.79□□□□□ -1
SCAF11-208ENST00000546534 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 TRAV26-1A0A087WT03 109 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 ZFP92A6NM28 416 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 CDS2O95674 445 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
SCAF11-208ENST00000546534 MEOX2P50222 304 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 OR5I1Q13606 314 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 MEF2DQ14814 521 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 RNASE10Q5GAN6 216 aaKnown RBP8.78□□□□□ -1
SCAF11-208ENST00000546534 SAMD13Q5VXD3 122 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 NOXA1Q86UR1 476 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 ARRDC1Q8N5I2 433 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 CCDC71LQ8N9Z2 235 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 GLYATL2Q8WU03 294 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 ZNF503Q96F45 646 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 TMEM222Q9H0R3 208 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 VCX3BQ9H321 246 aa8.78□□□□□ -1
SCAF11-208ENST00000546534 MRPS16Q9Y3D3 137 aaKnown RBP8.78□□□□□ -1
SCAF11-208ENST00000546534 TIMM8BQ9Y5J9 83 aaPredicted RBP8.78□□□□□ -1
SCAF11-208ENST00000546534 KRTAP4-8A0A0G2JLE6 195 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 A0A0J9YY99 117 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 SNRPGP15A8MWD9 76 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 B3GALNT1O75752 331 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 DUSP14O95147 198 aaKnown RBP8.77□□□□□ -1.01
SCAF11-208ENST00000546534 HTN1P15515 57 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 KRTAP10-1P60331 282 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 OR2F1Q13607 317 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 GAMTQ14353 236 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 IGFL4Q6B9Z1 124 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 GPR141Q7Z602 305 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 SELENOHQ8IZQ5 122 aaKnown RBP8.77□□□□□ -1.01
SCAF11-208ENST00000546534 OR13C8Q8NGS7 320 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 ZFAND1Q8TCF1 268 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 RBPMSQ93062 196 aaKnown RBP8.77□□□□□ -1.01
SCAF11-208ENST00000546534 LINC01587Q99440 93 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 RSG1Q9BU20 258 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 SLC25A39Q9BZJ4 359 aaPredicted RBP8.77□□□□□ -1.01
SCAF11-208ENST00000546534 SLC25A32Q9H2D1 315 aa8.77□□□□□ -1.01
SCAF11-208ENST00000546534 NOP10Q9NPE3 64 aaKnown RBP8.77□□□□□ -1.01
SCAF11-208ENST00000546534 RAB26Q9ULW5 256 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms