RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SLC25A21Q9BQT8 299 aaPredicted RBP13.47□□□□□ -0.25
CHPT1-202ENST00000546490 TMED3Q9Y3Q3 217 aa13.47□□□□□ -0.25
CHPT1-202ENST00000546490 TMEM189A5PLL7 270 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 SMIM9A6NGZ8 99 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
CHPT1-202ENST00000546490 ISLRO14498 428 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 SOCS3O14543 225 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 CFDP00746 253 aaPredicted RBP13.46□□□□□ -0.25
CHPT1-202ENST00000546490 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
CHPT1-202ENST00000546490 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
CHPT1-202ENST00000546490 DEFB1P60022 68 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 SPATA31B1PQ5VZV4 182 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 THAP8Q8NA92 274 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 CLUHP3Q96NS8 147 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 V9GYH0 126 aa13.46□□□□□ -0.25
CHPT1-202ENST00000546490 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
CHPT1-202ENST00000546490 MEOX2P50222 304 aa13.45□□□□□ -0.26
CHPT1-202ENST00000546490 FXYD7P58549 80 aa13.45□□□□□ -0.26
CHPT1-202ENST00000546490 OR4B1Q8NGF8 309 aa13.45□□□□□ -0.26
CHPT1-202ENST00000546490 NDUFAF3Q9BU61 184 aa13.45□□□□□ -0.26
CHPT1-202ENST00000546490 HERC2O95714 4834 aa13.45□□□□□ -0.26
CHPT1-202ENST00000546490 IGHV3OR16-12A0A075B7B8 117 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 TEX48A0A1B0GUV7 120 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 SYNGR2O43760 224 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 SFT2D2O95562 160 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 SPART-AS1P0CW21 52 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 S100A5P33763 92 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 GALR1P47211 349 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 PAX9P55771 341 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 PPP1R1AQ13522 171 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 ZNF79Q15937 498 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 GGNBP1Q5YKI7 109 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 ZNF709Q8N972 641 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 SLC45A2Q9UMX9 530 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 RFNGQ9Y644 331 aa13.44□□□□□ -0.26
CHPT1-202ENST00000546490 WRBO00258 174 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 P0DMU3 169 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 FAM231AP0DMU4 169 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 FAM231CP0DMU5 169 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 EMP1P54849 157 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 C16orf92Q96LL3 132 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 MAGT1Q9H0U3 335 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 SLC25A22Q9H936 323 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 RPRMQ9NS64 109 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 GOLT1BQ9Y3E0 138 aa13.43□□□□□ -0.26
CHPT1-202ENST00000546490 CCDC160A6NGH7 325 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 PRSS46E5RG02 174 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 HOXB5P09067 269 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 S100A7P31151 101 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 PSG9Q00887 426 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 AKR1C1Q04828 323 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 SLC35B3Q9H1N7 401 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 SLC25A32Q9H2D1 315 aa13.42□□□□□ -0.26
CHPT1-202ENST00000546490 A0A0J9YX75 114 aa13.41□□□□□ -0.26
CHPT1-202ENST00000546490 SPANXN5Q5MJ07 72 aa13.41□□□□□ -0.26
CHPT1-202ENST00000546490 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
CHPT1-202ENST00000546490 ZNF98A6NK75 572 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 F6UB75 175 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 H3BP45 60 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 UBE2MP61081 183 aaKnown RBP13.4□□□□□ -0.26
CHPT1-202ENST00000546490 LINC00336Q6ZUF6 198 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 ACOT7LQ6ZUV0 252 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 POM121L12Q8N7R1 296 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 GPR82Q96P67 336 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 C7orf50Q9BRJ6 194 aaKnown RBP13.4□□□□□ -0.26
CHPT1-202ENST00000546490 TMEM147Q9BVK8 224 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 SCRT1Q9BWW7 348 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 DOK5Q9P104 306 aa13.4□□□□□ -0.26
CHPT1-202ENST00000546490 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
CHPT1-202ENST00000546490 DNAH2Q9P225 4427 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 HBE1P02100 147 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 ORM2P19652 201 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 GSG1LQ6UXU4 331 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 CCDC190Q86UF4 302 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 OR4D5Q8NGN0 318 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 DKK2Q9UBU2 259 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 FAT2Q9NYQ8 4349 aa13.39□□□□□ -0.27
CHPT1-202ENST00000546490 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 INPP1P49441 399 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 NIPSNAP3BQ9BS92 247 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 RSG1Q9BU20 258 aa13.38□□□□□ -0.27
CHPT1-202ENST00000546490 SMCO3A2RU48 225 aa13.37□□□□□ -0.27
CHPT1-202ENST00000546490 GATA2P23769 480 aaPredicted RBP13.37□□□□□ -0.27
CHPT1-202ENST00000546490 RRN3P1Q2M238 152 aa13.37□□□□□ -0.27
CHPT1-202ENST00000546490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.37□□□□□ -0.27
CHPT1-202ENST00000546490 TMEM208Q9BTX3 173 aa13.37□□□□□ -0.27
CHPT1-202ENST00000546490 C9orf170A2RU37 121 aa13.36□□□□□ -0.27
CHPT1-202ENST00000546490 A8MTW9 85 aa13.36□□□□□ -0.27
CHPT1-202ENST00000546490 ADAP1O75689 374 aa13.36□□□□□ -0.27
CHPT1-202ENST00000546490 OXA1LQ15070 435 aa13.36□□□□□ -0.27
CHPT1-202ENST00000546490 TRIQKQ629K1 86 aa13.36□□□□□ -0.27
CHPT1-202ENST00000546490 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CHPT1-202ENST00000546490 C1orf158Q8N1D5 194 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms