RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 GPR82Q96P67 336 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 B9D2Q9BPU9 175 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 KCNIP2Q9NS61 270 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 OR5AC2Q9NZP5 309 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 HIGD1AQ9Y241 93 aa13.14□□□□□ -0.31
CD9-211ENST00000546073 UBE2L5PA0A1B0GUS4 154 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 C17orf112F2Z3M2 114 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 AGPAT2O15120 278 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 BUB3O43684 328 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 CD7P09564 240 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 GIPP09681 153 aaPredicted RBP13.13□□□□□ -0.31
CD9-211ENST00000546073 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
CD9-211ENST00000546073 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
CD9-211ENST00000546073 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
CD9-211ENST00000546073 OR5C1Q8NGR4 320 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 MS4A6AQ9H2W1 248 aa13.13□□□□□ -0.31
CD9-211ENST00000546073 IGKV1OR2-108A0A075B7D4 117 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 ELOA3CA0A087WX78 387 aaPredicted RBP13.12□□□□□ -0.31
CD9-211ENST00000546073 A8MZ25 164 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 COX7A2P2O60397 106 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 FGF7P21781 194 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 ID1P41134 155 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 ARL16Q0P5N6 197 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 Q8N1Y9 231 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 OR1L4Q8NGR5 311 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 FAM110AQ9BQ89 295 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 C11orf1Q9H5F2 150 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 SRD5A3Q9H8P0 318 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 DOK5Q9P104 306 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 MBD2Q9UBB5 411 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 U3KQE9 123 aa13.12□□□□□ -0.31
CD9-211ENST00000546073 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 CXCL3P19876 107 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
CD9-211ENST00000546073 NHLH2Q02577 135 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 CLINT1Q14677 625 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 DEFB125Q8N687 156 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 PFDN5Q99471 154 aa13.11□□□□□ -0.31
CD9-211ENST00000546073 MEOX2P50222 304 aa13.1□□□□□ -0.31
CD9-211ENST00000546073 OR11H7Q8NGC8 314 aa13.1□□□□□ -0.31
CD9-211ENST00000546073 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
CD9-211ENST00000546073 UBQLN2Q9UHD9 624 aa13.1□□□□□ -0.31
CD9-211ENST00000546073 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
CD9-211ENST00000546073 MEGF8Q7Z7M0 2845 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 RPL7P18124 248 aaKnown RBP13.09□□□□□ -0.31
CD9-211ENST00000546073 ATF4P18848 351 aaPredicted RBP13.09□□□□□ -0.31
CD9-211ENST00000546073 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 GLMPQ8WWB7 406 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 ATP5SQ99766 215 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 RNF126Q9BV68 326 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 SORL1Q92673 2214 aa13.09□□□□□ -0.31
CD9-211ENST00000546073 LOC102724200A0A096LPH7 203 aaPredicted RBP13.08□□□□□ -0.32
CD9-211ENST00000546073 ZNF98A6NK75 572 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 H0YIZ8 118 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 RPL29P47914 159 aaKnown RBP13.08□□□□□ -0.32
CD9-211ENST00000546073 APOC4P55056 127 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 PLP1P60201 277 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 B2MP61769 119 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 C10orf113Q5VZT2 155 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 OR2T35Q8NGX2 323 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 MGST2Q99735 147 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 ASCL2Q99929 193 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 SLC25A39Q9BZJ4 359 aaPredicted RBP13.08□□□□□ -0.32
CD9-211ENST00000546073 ARV1Q9H2C2 271 aa13.08□□□□□ -0.32
CD9-211ENST00000546073 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
CD9-211ENST00000546073 SEPSECSQ9HD40 501 aaKnown RBP13.07□□□□□ -0.32
CD9-211ENST00000546073 DNAJC4Q9NNZ3 241 aa13.07□□□□□ -0.32
CD9-211ENST00000546073 C19orf73Q9NVV2 129 aa13.07□□□□□ -0.32
CD9-211ENST00000546073 DEFB131AP59861 70 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 ZNF266Q14584 549 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 LINC00305Q7Z4B0 112 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 STHQ8IWL8 128 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 CHAC2Q8WUX2 184 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 C16orf92Q96LL3 132 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 SLC39A9Q9NUM3 307 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 PXMP4Q9Y6I8 212 aa13.06□□□□□ -0.32
CD9-211ENST00000546073 FXYD6-FXYD2A0A087WZ82 144 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 K7EQG2 157 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 LYL1P12980 280 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 TMEM182Q6ZP80 229 aaPredicted RBP13.05□□□□□ -0.32
CD9-211ENST00000546073 BPIFA4PQ86YQ2 179 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 RSG1Q9BU20 258 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 SMIM3Q9BZL3 60 aa13.05□□□□□ -0.32
CD9-211ENST00000546073 H3BRN7 92 aa13.04□□□□□ -0.32
CD9-211ENST00000546073 ZNF688P0C7X2 276 aa13.04□□□□□ -0.32
CD9-211ENST00000546073 OPCMLQ14982 345 aa13.04□□□□□ -0.32
CD9-211ENST00000546073 MIC13Q5XKP0 118 aa13.04□□□□□ -0.32
CD9-211ENST00000546073 GATAD1Q8WUU5 269 aa13.04□□□□□ -0.32
CD9-211ENST00000546073 SPATA25Q9BR10 227 aa13.04□□□□□ -0.32
CD9-211ENST00000546073 WDR61Q9GZS3 305 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms