RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 TRAV30A0A087WSZ9 112 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 TEX13DA0A0J9YY54 714 aaPredicted RBP6.13□□□□□ -1.43
USP28-215ENST00000545608 IGLL5B9A064 214 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 L7N2F9 121 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 IGLC1P0CG04 106 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 TAS2R19P59542 299 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 BTN1A1Q13410 526 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 FCN2Q15485 313 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 ACTL10Q5JWF8 245 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 PRSS54Q6PEW0 395 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 MORN3Q6PF18 240 aaPredicted RBP6.13□□□□□ -1.43
USP28-215ENST00000545608 SELENOHQ8IZQ5 122 aaKnown RBP6.13□□□□□ -1.43
USP28-215ENST00000545608 TOMM5Q8N4H5 51 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 OR52E5Q8NH55 327 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 TMEM170AQ8WVE7 144 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 TMEM222Q9H0R3 208 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.13□□□□□ -1.43
USP28-215ENST00000545608 CLEC5AQ9NY25 188 aa6.13□□□□□ -1.43
USP28-215ENST00000545608 RPS10-NUDT3A0A1W2PQS6 291 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 ZNF705EA8MWA4 302 aaPredicted RBP6.12□□□□□ -1.43
USP28-215ENST00000545608 AGRNO00468 2067 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 B3GALNT1O75752 331 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 NXPH3O95157 252 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 TCRBP04435 133 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 SULT1A3P0DMM9 295 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 SULT1A4P0DMN0 295 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 SPP1P10451 314 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 HLA-DMBP28068 263 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 RND2P52198 227 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 TCTAP57738 103 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 RAP2BP61225 183 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 YPEL3P61236 119 aaPredicted RBP6.12□□□□□ -1.43
USP28-215ENST00000545608 DHODHQ02127 395 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 DHRS2Q13268 280 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 MEF2DQ14814 521 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 C2orf83Q53S99 150 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 C16orf54Q6UWD8 224 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 FAM219AQ8IW50 185 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 EIF4E3Q8N5X7 224 aaKnown RBP6.12□□□□□ -1.43
USP28-215ENST00000545608 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 OR1S2Q8NGQ3 325 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 Q8WTZ3 238 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 GLMPQ8WWB7 406 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 NARS2Q96I59 477 aaKnown RBP6.12□□□□□ -1.43
USP28-215ENST00000545608 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 HRH4Q9H3N8 390 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 NAA60Q9H7X0 242 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 HEYLQ9NQ87 328 aaPredicted RBP6.12□□□□□ -1.43
USP28-215ENST00000545608 CACNG5Q9UF02 275 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 GPR132Q9UNW8 380 aa6.12□□□□□ -1.43
USP28-215ENST00000545608 C14orf166Q9Y224 244 aaKnown RBP6.12□□□□□ -1.43
USP28-215ENST00000545608 KMT2AQ03164 3969 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 HELTA6NFD8 242 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 CEBPZOSA8MTT3 80 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 C11orf94C9JXX5 98 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 TEX46H3BTG2 121 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 GABARAPH6UMI1 98 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 SCGB2A1O75556 95 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 SCO1O75880 301 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 GIPP09681 153 aaPredicted RBP6.11□□□□□ -1.43
USP28-215ENST00000545608 MIFP14174 115 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 OR10J1P30954 320 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 OPCMLQ14982 345 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 USF2Q15853 346 aaPredicted RBP6.11□□□□□ -1.43
USP28-215ENST00000545608 TMEM41BQ5BJD5 291 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 PSMG4Q5JS54 123 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 TMEM268Q5VZI3 342 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 Q6ZTC4 211 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 SLC24A4Q8NFF2 622 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 RNASEH2CQ8TDP1 164 aaKnown RBP6.11□□□□□ -1.43
USP28-215ENST00000545608 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
USP28-215ENST00000545608 TRAV10A0A0B4J240 114 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 CRYM-AS1A6NIL9 109 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 PCP4L1A6NKN8 68 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 DISC1C4P0D8 188 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 SMLR1H3BR10 107 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 BUB3O43684 328 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 IL4P05112 153 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 S100A9P06702 114 aaKnown RBP6.1□□□□□ -1.43
USP28-215ENST00000545608 SLC25A4P12235 298 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 NPY1RP25929 384 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 MRPS10P82664 201 aaKnown RBP6.1□□□□□ -1.43
USP28-215ENST00000545608 SSBP1Q04837 148 aaKnown RBP6.1□□□□□ -1.43
USP28-215ENST00000545608 SURF2Q15527 256 aaPredicted RBP6.1□□□□□ -1.43
USP28-215ENST00000545608 LGALSLQ3ZCW2 172 aaPredicted RBP6.1□□□□□ -1.43
USP28-215ENST00000545608 OR4C16Q8NGL9 310 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 OR2T35Q8NGX2 323 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 SMIM4Q8WVI0 70 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 SLC25A32Q9H2D1 315 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 BIN3Q9NQY0 253 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
USP28-215ENST00000545608 TMEM56-RWDD3S4R434 201 aa6.1□□□□□ -1.43
USP28-215ENST00000545608 DNAH10Q8IVF4 4471 aa6.09□□□□□ -1.43
USP28-215ENST00000545608 IGHV4-4A0A075B6R2 117 aa6.09□□□□□ -1.43
USP28-215ENST00000545608 TRAV6A0A075B6T7 132 aa6.09□□□□□ -1.43
USP28-215ENST00000545608 HMSDA8MTL9 139 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms