RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 PLP1P60201 277 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 LYZP61626 148 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 DLK1P80370 383 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 OR2F1Q13607 317 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 TRPT1Q86TN4 253 aaKnown RBP8.37□□□□□ -1.07
YBX3-216ENST00000544622 OR10P1Q8NGE3 313 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 PBDC1Q9BVG4 233 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 GGACTQ9BVM4 153 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 NPVFQ9HCQ7 196 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 PFDN2Q9UHV9 154 aa8.37□□□□□ -1.07
YBX3-216ENST00000544622 DEDDO75618 318 aa8.36□□□□□ -1.07
YBX3-216ENST00000544622 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
YBX3-216ENST00000544622 ZNF688P0C7X2 276 aa8.36□□□□□ -1.07
YBX3-216ENST00000544622 BPIFCQ8NFQ6 507 aa8.36□□□□□ -1.07
YBX3-216ENST00000544622 MARVELD1Q9BSK0 173 aa8.36□□□□□ -1.07
YBX3-216ENST00000544622 C5orf51A6NDU8 294 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 ZNF98A6NK75 572 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 ATF4P18848 351 aaPredicted RBP8.35□□□□□ -1.07
YBX3-216ENST00000544622 AKR1C1Q04828 323 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 CYP2G1PQ6ZSU1 146 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 STHQ8IWL8 128 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 ENKURQ8TC29 256 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 GATAD1Q8WUU5 269 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 FBXL17Q9UF56 701 aa8.35□□□□□ -1.07
YBX3-216ENST00000544622 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 FAM25EA8MYX2 175 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 INMT-MINDY4F8WBC2 141 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 ORM2P19652 201 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 RRAS2P62070 204 aaPredicted RBP8.34□□□□□ -1.07
YBX3-216ENST00000544622 SNRPD3P62318 126 aaKnown RBP8.34□□□□□ -1.07
YBX3-216ENST00000544622 SELENOTP62341 195 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 EWSR1Q01844 656 aaKnown RBP eCLIP8.34□□□□□ -1.07
YBX3-216ENST00000544622 RAB32Q13637 225 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 PSMG4Q5JS54 123 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 GSG1LQ6UXU4 331 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 PATE2Q6UY27 113 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 CSNK1G2-AS1Q8NCQ2 148 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 IL17DQ8TAD2 202 aa8.34□□□□□ -1.07
YBX3-216ENST00000544622 LYRM2Q9NU23 88 aaPredicted RBP8.34□□□□□ -1.07
YBX3-216ENST00000544622 LSM5Q9Y4Y9 91 aaKnown RBP8.34□□□□□ -1.07
YBX3-216ENST00000544622 AGRNO00468 2067 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 A0A0J9YWU9 116 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 FAM24AA6NFZ4 105 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 H3BMM0 161 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 PRAF2O60831 178 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 CA1P00915 261 aaPredicted RBP8.33□□□□□ -1.08
YBX3-216ENST00000544622 SPP1P10451 314 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 VWC2Q2TAL6 325 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 ACTL10Q5JWF8 245 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 ZFAND6Q6FIF0 208 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 MORN3Q6PF18 240 aaPredicted RBP8.33□□□□□ -1.08
YBX3-216ENST00000544622 OR8I2Q8N0Y5 310 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 RARRES2Q99969 163 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 SLC25A39Q9BZJ4 359 aaPredicted RBP8.33□□□□□ -1.08
YBX3-216ENST00000544622 SLC25A32Q9H2D1 315 aa8.33□□□□□ -1.08
YBX3-216ENST00000544622 GPN1Q9HCN4 374 aaPredicted RBP8.33□□□□□ -1.08
YBX3-216ENST00000544622 SMCO3A2RU48 225 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 H3BRN7 92 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 L7N2F9 121 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 HYPMO75409 117 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 LINC00869P0C866 280 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 C4BPBP20851 252 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 PSMB3P49720 205 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 VAMP2P63027 116 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 SLC38A11Q08AI6 406 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 TMEM41BQ5BJD5 291 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 GDF5OSQ5U4N7 250 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 OR1B1Q8NGR6 318 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 SHANK2-AS3Q9BTD1 123 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 TMEM147Q9BVK8 224 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 NMES1Q9C002 83 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 MGAT4CQ9UBM8 478 aa8.32□□□□□ -1.08
YBX3-216ENST00000544622 IGSF23A1L1A6 192 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 ZNF705EA8MWA4 302 aaPredicted RBP8.31□□□□□ -1.08
YBX3-216ENST00000544622 ISLRO14498 428 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 AGPAT2O15120 278 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 MRPS12O15235 138 aaKnown RBP8.31□□□□□ -1.08
YBX3-216ENST00000544622 CST7O76096 145 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 SIX6O95475 246 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
YBX3-216ENST00000544622 S100A7P31151 101 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 S100A11P31949 105 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 MEOX2P50222 304 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 SULT1A1P50225 295 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 CAV2P51636 162 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 H2BFSP57053 126 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 DEFA1P59665 94 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 DEFA3P59666 94 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 PXDC1Q5TGL8 231 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 SAMD13Q5VXD3 122 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 OR11H2Q8NH07 326 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 CHAC2Q8WUX2 184 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 TMEM37Q8WXS4 190 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 PPP1R14BQ96C90 147 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 CLUHP3Q96NS8 147 aa8.31□□□□□ -1.08
YBX3-216ENST00000544622 GPR82Q96P67 336 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms