RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 HIGD1AQ9Y241 93 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 RYR2Q92736 4967 aa7.33□□□□□ -1.24
YBX3-215ENST00000544504 CTXND1A0A1B0GTU2 59 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 WI2-2373I1.2A0A1W2PRP0 233 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 SEC14L6B5MCN3 397 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 I3L521 148 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 YIF1AO95070 293 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 IL4P05112 153 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 OR5G3P0C626 314 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 ORM2P19652 201 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 BMI1P35226 326 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 CDC34P49427 236 aaPredicted RBP7.32□□□□□ -1.24
YBX3-215ENST00000544504 IFITM2Q01629 132 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 TCTEX1D4Q5JR98 221 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 REC114Q7Z4M0 266 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 NDUFA11Q86Y39 141 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 KLHL30-AS1Q8NEE0 82 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 STXBP6Q8NFX7 210 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 OR1B1Q8NGR6 318 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 METTL26Q96S19 204 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 PBDC1Q9BVG4 233 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 RABAC1Q9UI14 185 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
YBX3-215ENST00000544504 PUS1Q9Y606 427 aaKnown RBP eCLIP7.32□□□□□ -1.24
YBX3-215ENST00000544504 TRAV1-1A0A0B4J248 108 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 PPP5D1E7EU14 171 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 LINC01619G3V211 115 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 K7EMT4 169 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 H2AFB1P0C5Y9 115 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 CD28P10747 220 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 GATA2P23769 480 aaPredicted RBP7.31□□□□□ -1.24
YBX3-215ENST00000544504 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 CLLU1Q5K131 121 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 FAM74A1Q5RGS3 127 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 FAM78BQ5VT40 261 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 FAM122CQ6P4D5 195 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 TOMM20LQ6UXN7 152 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
YBX3-215ENST00000544504 RCC1LQ96I51 464 aaKnown RBP7.31□□□□□ -1.24
YBX3-215ENST00000544504 OR5B12Q96R08 314 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 TMEM231Q9H6L2 316 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 TECRQ9NZ01 308 aaKnown RBP7.31□□□□□ -1.24
YBX3-215ENST00000544504 MRPL27Q9P0M9 148 aaKnown RBP7.31□□□□□ -1.24
YBX3-215ENST00000544504 UFC1Q9Y3C8 167 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
YBX3-215ENST00000544504 A0A1W2PS18 150 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 MAP1LC3B2A6NCE7 125 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 LGALS9O00182 355 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 CXorf1O96002 111 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 TRBV12-3P01733 135 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 C8orf88P0DMB2 117 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 NPPCP23582 126 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 PPT1P50897 306 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 C1orf194Q5T5A4 169 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 KPRPQ5T749 579 aaPredicted RBP7.3□□□□□ -1.24
YBX3-215ENST00000544504 PQLC2Q6ZP29 291 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 LINC00305Q7Z4B0 112 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 OR1N2Q8NGR9 330 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 MBD3L1Q8WWY6 194 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 TMEM190Q8WZ59 177 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 RAB24Q969Q5 203 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 GRAMD2BQ96HH9 432 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 GPR82Q96P67 336 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 CITED2Q99967 270 aaPredicted RBP7.3□□□□□ -1.24
YBX3-215ENST00000544504 C20orf24Q9BUV8 137 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 MAP1LC3BQ9GZQ8 125 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 DAZ1Q9NQZ3 744 aaKnown RBP7.3□□□□□ -1.24
YBX3-215ENST00000544504 DOK5Q9P104 306 aa7.3□□□□□ -1.24
YBX3-215ENST00000544504 DNAH3Q8TD57 4116 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 IGHV4OR15-8A0A075B7B6 117 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 A0A087WW49 117 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 ZNF320A2RRD8 509 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 A8MWP6 167 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 H3BRN7 92 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 NMBP08949 121 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 CRYBB3P26998 211 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 HOXD3P31249 432 aaPredicted RBP7.29□□□□□ -1.24
YBX3-215ENST00000544504 TAGLN2P37802 199 aaKnown RBP7.29□□□□□ -1.24
YBX3-215ENST00000544504 PATE2Q6UY27 113 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 OR11H1Q8NG94 326 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 SFT2D1Q8WV19 159 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 TMEM37Q8WXS4 190 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 MARC2Q969Z3 335 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 SHANK2-AS3Q9BTD1 123 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 ELOVL1Q9BW60 279 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 SLC25A39Q9BZJ4 359 aaPredicted RBP7.29□□□□□ -1.24
YBX3-215ENST00000544504 VSIRQ9H7M9 311 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 SLC25A22Q9H936 323 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 PEMTQ9UBM1 199 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 RFNGQ9Y644 331 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 DNAH9Q9NYC9 4486 aa7.29□□□□□ -1.24
YBX3-215ENST00000544504 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 G3V4G9 280 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 CCL24O00175 119 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 IFNA1P01562 189 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 CD5P06127 495 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 STAG3L2P0CL84 134 aa7.28□□□□□ -1.24
YBX3-215ENST00000544504 STAG3L3P0CL85 134 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms