RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ZNF506Q5JVG8 444 aa23.52■■□□□ 1.36
CCM2-219ENST00000544363 RNF152Q8N8N0 203 aa23.52■■□□□ 1.36
CCM2-219ENST00000544363 LOC102723971A0A1B0GUV8 181 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 RPLP1P05386 114 aaKnown RBP23.51■■□□□ 1.35
CCM2-219ENST00000544363 ARL3P36405 182 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 PPT1P50897 306 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 RELQ04864 619 aaPredicted RBP23.51■■□□□ 1.35
CCM2-219ENST00000544363 USF2Q15853 346 aaPredicted RBP23.51■■□□□ 1.35
CCM2-219ENST00000544363 OR5AU1Q8NGC0 362 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 SLC25A39Q9BZJ4 359 aaPredicted RBP23.51■■□□□ 1.35
CCM2-219ENST00000544363 MANBALQ9NQG1 85 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 IGHV3-35A0A0C4DH35 117 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 CYSRT1A8MQ03 144 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 OR7C2O60412 319 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 MYOZ3Q8TDC0 251 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 ZNF503Q96F45 646 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 NARS2Q96I59 477 aaKnown RBP23.51■■□□□ 1.35
CCM2-219ENST00000544363 SMDT1Q9H4I9 107 aa23.51■■□□□ 1.35
CCM2-219ENST00000544363 CRLF1O75462 422 aa23.5■■□□□ 1.35
CCM2-219ENST00000544363 TRBV12-3P01733 135 aa23.5■■□□□ 1.35
CCM2-219ENST00000544363 ICAM4Q14773 271 aa23.5■■□□□ 1.35
CCM2-219ENST00000544363 TOMM20LQ6UXN7 152 aa23.5■■□□□ 1.35
CCM2-219ENST00000544363 C9JQL5 133 aa23.49■■□□□ 1.35
CCM2-219ENST00000544363 FAM209BQ5JX69 171 aa23.49■■□□□ 1.35
CCM2-219ENST00000544363 KLHDC1Q8N7A1 406 aa23.49■■□□□ 1.35
CCM2-219ENST00000544363 C16orf95Q9H693 158 aa23.49■■□□□ 1.35
CCM2-219ENST00000544363 CUBNO60494 3623 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 ANKRD34BA5PLL1 514 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 TAGLN2P37802 199 aaKnown RBP23.48■■□□□ 1.35
CCM2-219ENST00000544363 S100A7AQ86SG5 101 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 ZFAND3Q9H8U3 227 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 TMEM167BQ9NRX6 74 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 VAX2Q9UIW0 290 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 TMEM218A2RU14 115 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 RXFP4Q8TDU9 374 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 SHANK2-AS3Q9BTD1 123 aa23.48■■□□□ 1.35
CCM2-219ENST00000544363 H3BRN7 92 aa23.47■■□□□ 1.35
CCM2-219ENST00000544363 BMPR1BO00238 502 aa23.47■■□□□ 1.35
CCM2-219ENST00000544363 STXBP6Q8NFX7 210 aa23.47■■□□□ 1.35
CCM2-219ENST00000544363 KRBOX1C9JBD0 128 aa23.46■■□□□ 1.35
CCM2-219ENST00000544363 PAGE4O60829 102 aa23.46■■□□□ 1.35
CCM2-219ENST00000544363 LINC00052Q96N35 136 aa23.46■■□□□ 1.35
CCM2-219ENST00000544363 PAXXQ9BUH6 204 aa23.46■■□□□ 1.35
CCM2-219ENST00000544363 OR51M1Q9H341 326 aa23.46■■□□□ 1.35
CCM2-219ENST00000544363 PEF1Q9UBV8 284 aaKnown RBP23.46■■□□□ 1.35
CCM2-219ENST00000544363 TCF21O43680 179 aa23.45■■□□□ 1.34
CCM2-219ENST00000544363 HSPB1P04792 205 aaKnown RBP23.45■■□□□ 1.34
CCM2-219ENST00000544363 LEMD1Q68G75 181 aa23.45■■□□□ 1.34
CCM2-219ENST00000544363 SUN5Q8TC36 379 aa23.45■■□□□ 1.34
CCM2-219ENST00000544363 UBE2E2Q96LR5 201 aa23.45■■□□□ 1.34
CCM2-219ENST00000544363 RABAC1Q9UI14 185 aa23.45■■□□□ 1.34
CCM2-219ENST00000544363 OR10J4P0C629 311 aa23.44■■□□□ 1.34
CCM2-219ENST00000544363 OR5B12Q96R08 314 aa23.44■■□□□ 1.34
CCM2-219ENST00000544363 PYYP10082 97 aa23.44■■□□□ 1.34
CCM2-219ENST00000544363 ZP3P21754 424 aa23.44■■□□□ 1.34
CCM2-219ENST00000544363 UBE2G2P60604 165 aa23.44■■□□□ 1.34
CCM2-219ENST00000544363 GGCTO75223 188 aaKnown RBP23.43■■□□□ 1.34
CCM2-219ENST00000544363 UBE2L3P68036 154 aaKnown RBP23.43■■□□□ 1.34
CCM2-219ENST00000544363 SLC35B3Q9H1N7 401 aa23.43■■□□□ 1.34
CCM2-219ENST00000544363 FN1P02751 2386 aaKnown RBP23.42■■□□□ 1.34
CCM2-219ENST00000544363 NSD1Q96L73 2696 aaPredicted RBP23.42■■□□□ 1.34
CCM2-219ENST00000544363 IGHV3OR16-8A0A075B7F1 116 aa23.42■■□□□ 1.34
CCM2-219ENST00000544363 ZNF98A6NK75 572 aa23.42■■□□□ 1.34
CCM2-219ENST00000544363 NDUFA7O95182 113 aa23.42■■□□□ 1.34
CCM2-219ENST00000544363 SRP19P09132 144 aaKnown RBP23.42■■□□□ 1.34
CCM2-219ENST00000544363 SFTA3P0C7M3 94 aa23.42■■□□□ 1.34
CCM2-219ENST00000544363 MEF2BQ02080 365 aaPredicted RBP23.42■■□□□ 1.34
CCM2-219ENST00000544363 LINC01006Q8NI28 216 aa23.42■■□□□ 1.34
CCM2-219ENST00000544363 NDUFA4O00483 81 aa23.41■■□□□ 1.34
CCM2-219ENST00000544363 S100A7P31151 101 aa23.41■■□□□ 1.34
CCM2-219ENST00000544363 WIPF2Q8TF74 440 aaPredicted RBP23.41■■□□□ 1.34
CCM2-219ENST00000544363 FXYD5Q96DB9 178 aa23.41■■□□□ 1.34
CCM2-219ENST00000544363 TMEM14CQ9P0S9 112 aa23.41■■□□□ 1.34
CCM2-219ENST00000544363 LGALS1P09382 135 aaKnown RBP23.41■■□□□ 1.34
CCM2-219ENST00000544363 GP9P14770 177 aa23.41■■□□□ 1.34
CCM2-219ENST00000544363 ARL2-SNX15V9GYD0 113 aa23.41■■□□□ 1.34
CCM2-219ENST00000544363 SETXQ7Z333 2677 aaKnown RBP23.4■■□□□ 1.34
CCM2-219ENST00000544363 CLPSL1A2RUU4 121 aa23.4■■□□□ 1.34
CCM2-219ENST00000544363 CD81P60033 236 aa23.4■■□□□ 1.34
CCM2-219ENST00000544363 CST9LP1Q5W188 147 aa23.4■■□□□ 1.34
CCM2-219ENST00000544363 YTHDF2Q9Y5A9 579 aaKnown RBP23.4■■□□□ 1.34
CCM2-219ENST00000544363 F8P00451 2351 aa23.39■■□□□ 1.33
CCM2-219ENST00000544363 FAM74A7A6NL05 159 aa23.39■■□□□ 1.33
CCM2-219ENST00000544363 TCTEX1D4Q5JR98 221 aa23.39■■□□□ 1.33
CCM2-219ENST00000544363 RNF24Q9Y225 148 aa23.39■■□□□ 1.33
CCM2-219ENST00000544363 C11orf94C9JXX5 98 aa23.38■■□□□ 1.33
CCM2-219ENST00000544363 ADCYAP1P18509 176 aa23.38■■□□□ 1.33
CCM2-219ENST00000544363 TXNDC17Q9BRA2 123 aa23.38■■□□□ 1.33
CCM2-219ENST00000544363 F8W036 122 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 NDUFS6O75380 124 aaKnown RBP23.37■■□□□ 1.33
CCM2-219ENST00000544363 BPIFA4PQ86YQ2 179 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 OR4F5Q8NH21 305 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 OR4F4Q96R69 305 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 METTL26Q96S19 204 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 C20orf24Q9BUV8 137 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 SEC11CQ9BY50 192 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 CDX1P47902 265 aaPredicted RBP23.37■■□□□ 1.33
CCM2-219ENST00000544363 ATP5G3P48201 142 aa23.37■■□□□ 1.33
CCM2-219ENST00000544363 C10orf91Q5T1B1 145 aa23.36■■□□□ 1.33
CCM2-219ENST00000544363 UNQ9165/PRO28630Q6UXU0 137 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms