RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 IGHV3-66A0A0C4DH42 116 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 OR5I1Q13606 314 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 HIST2H2BDQ6DRA6 164 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 C10orf99Q6UWK7 81 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 OR1L4Q8NGR5 311 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 Q8WTZ3 238 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 NAT8Q9UHE5 227 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 ANK3Q12955 4377 aaKnown RBP10.67□□□□□ -0.7
HCFC2-202ENST00000544223 IGHV3-49A0A0A0MS15 119 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 CLEC3BP05452 202 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 FCGR2BP31994 310 aaPredicted RBP10.67□□□□□ -0.7
HCFC2-202ENST00000544223 RPL35P42766 123 aaKnown RBP10.67□□□□□ -0.7
HCFC2-202ENST00000544223 TAS2R45P59539 299 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 CLEC19AQ6UXS0 136 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 PQLC2Q6ZP29 291 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 PFDN5Q99471 154 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 SLC25A39Q9BZJ4 359 aaPredicted RBP10.67□□□□□ -0.7
HCFC2-202ENST00000544223 GNB4Q9HAV0 340 aa10.67□□□□□ -0.7
HCFC2-202ENST00000544223 PPP5D1E7EU14 171 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 ZNF207O43670 478 aaKnown RBP10.66□□□□□ -0.7
HCFC2-202ENST00000544223 PDE6DO43924 150 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 CTSGP08311 255 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 SRSF8Q9BRL6 282 aaKnown RBP10.66□□□□□ -0.7
HCFC2-202ENST00000544223 KLK15Q9H2R5 256 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 HIGD1AQ9Y241 93 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 K7EN84 100 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 MFAP4P55083 255 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 LINC01551Q86U37 167 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 OCC1Q8TAD7 63 aa10.66□□□□□ -0.7
HCFC2-202ENST00000544223 TSPAN9O75954 239 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 TRBV12-3P01733 135 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 IGHV3-11P01762 117 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 RPL15P61313 204 aaKnown RBP10.65□□□□□ -0.7
HCFC2-202ENST00000544223 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 RNF125Q96EQ8 232 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
HCFC2-202ENST00000544223 ELOA3CA0A087WX78 387 aaPredicted RBP10.65□□□□□ -0.7
HCFC2-202ENST00000544223 TRAV41A0A0B4J266 112 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 A6NDX4 124 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 LOXL1Q08397 574 aaPredicted RBP10.65□□□□□ -0.7
HCFC2-202ENST00000544223 ELOBQ15370 118 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 ZNF600Q6ZNG1 722 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
HCFC2-202ENST00000544223 ZNF48Q96MX3 618 aaPredicted RBP10.65□□□□□ -0.7
HCFC2-202ENST00000544223 MRPL32Q9BYC8 188 aaKnown RBP10.65□□□□□ -0.7
HCFC2-202ENST00000544223 GP9P14770 177 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
HCFC2-202ENST00000544223 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 OR5B12Q96R08 314 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 C19orf24Q9BVV8 132 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 YPEL4Q96NS1 127 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 ZNF586Q9NXT0 402 aa10.64□□□□□ -0.71
HCFC2-202ENST00000544223 SLC17A3O00476 420 aa10.63□□□□□ -0.71
HCFC2-202ENST00000544223 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
HCFC2-202ENST00000544223 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
HCFC2-202ENST00000544223 PGPA6NDG6 321 aa10.63□□□□□ -0.71
HCFC2-202ENST00000544223 FAM3BP58499 235 aaPredicted RBP10.63□□□□□ -0.71
HCFC2-202ENST00000544223 CENPWQ5EE01 88 aa10.63□□□□□ -0.71
HCFC2-202ENST00000544223 THYN1Q9P016 225 aa10.63□□□□□ -0.71
HCFC2-202ENST00000544223 TOMM40O96008 361 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 RAB5AP20339 215 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 C15orf54Q8N8G6 183 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 ZNF502Q8TBZ5 544 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 TRAV8-1A0A0A6YYK1 113 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 HELTA6NFD8 242 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 F6UZH7 168 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 APOHP02749 345 aaPredicted RBP10.62□□□□□ -0.71
HCFC2-202ENST00000544223 TRGV3P03979 118 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
HCFC2-202ENST00000544223 RNASE7Q9H1E1 156 aaKnown RBP10.62□□□□□ -0.71
HCFC2-202ENST00000544223 MLXQ9UH92 298 aa10.62□□□□□ -0.71
HCFC2-202ENST00000544223 TRBV9A0A0B4J1U6 114 aa10.61□□□□□ -0.71
HCFC2-202ENST00000544223 ISLRO14498 428 aa10.61□□□□□ -0.71
HCFC2-202ENST00000544223 C1QL4Q86Z23 238 aa10.61□□□□□ -0.71
HCFC2-202ENST00000544223 OR1L6Q8NGR2 347 aa10.61□□□□□ -0.71
HCFC2-202ENST00000544223 HOXA3O43365 443 aaPredicted RBP10.61□□□□□ -0.71
HCFC2-202ENST00000544223 GATA3P23771 443 aa10.61□□□□□ -0.71
HCFC2-202ENST00000544223 TPPP2P59282 170 aa10.61□□□□□ -0.71
HCFC2-202ENST00000544223 PNRC1Q12796 327 aaPredicted RBP10.61□□□□□ -0.71
HCFC2-202ENST00000544223 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
HCFC2-202ENST00000544223 MGST1P10620 155 aaKnown RBP10.6□□□□□ -0.71
HCFC2-202ENST00000544223 IER3P46695 156 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 PLP1P60201 277 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 Q9H3A6 140 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 A0A087WWC5 75 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 A0A1W2PRE2 83 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
HCFC2-202ENST00000544223 MT-ND4LP03901 98 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 PF4V1P10720 104 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 RNF2Q99496 336 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 SHANK2-AS3Q9BTD1 123 aa10.6□□□□□ -0.71
HCFC2-202ENST00000544223 SETXQ7Z333 2677 aaKnown RBP10.59□□□□□ -0.71
HCFC2-202ENST00000544223 A0A1W2PPQ1 181 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms