RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ACTL10Q5JWF8 245 aa17.04■□□□□ 0.32
CHFR-222ENST00000544093 RCL1Q9Y2P8 373 aaKnown RBP17.04■□□□□ 0.32
CHFR-222ENST00000544093 AGRNO00468 2067 aa17.04■□□□□ 0.32
CHFR-222ENST00000544093 SELENOTP62341 195 aa17.03■□□□□ 0.32
CHFR-222ENST00000544093 C12orf45Q8N5I9 185 aaPredicted RBP17.03■□□□□ 0.32
CHFR-222ENST00000544093 OR11H2Q8NH07 326 aa17.03■□□□□ 0.32
CHFR-222ENST00000544093 TMEM147Q9BVK8 224 aa17.03■□□□□ 0.32
CHFR-222ENST00000544093 MGAT4CQ9UBM8 478 aa17.03■□□□□ 0.32
CHFR-222ENST00000544093 TBC1D24Q9ULP9 559 aa17.03■□□□□ 0.32
CHFR-222ENST00000544093 STARD9Q9P2P6 4700 aa17.03■□□□□ 0.32
CHFR-222ENST00000544093 KNCNA6PVL3 124 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 L7N2F9 121 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 MBPP02686 304 aaPredicted RBP17.02■□□□□ 0.32
CHFR-222ENST00000544093 METTL15P1P0C7V9 234 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 GALR1P47211 349 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 PSMB3P49720 205 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 MEOX2P50222 304 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 NUTF2P61970 127 aaKnown RBP17.02■□□□□ 0.32
CHFR-222ENST00000544093 VAMP2P63027 116 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 S100A7AQ86SG5 101 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 GPR82Q96P67 336 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 SEC22CQ9BRL7 303 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 GGACTQ9BVM4 153 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 NPVFQ9HCQ7 196 aa17.02■□□□□ 0.32
CHFR-222ENST00000544093 C5orf51A6NDU8 294 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 FAM25EA8MYX2 175 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 UPK1BO75841 260 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 JTBO76095 146 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 IL5P05113 134 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 CYP2G1PQ6ZSU1 146 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 ENKURQ8TC29 256 aa17.01■□□□□ 0.31
CHFR-222ENST00000544093 C11orf68Q9H3H3 251 aaKnown RBP17.01■□□□□ 0.31
CHFR-222ENST00000544093 RYR3Q15413 4870 aa17■□□□□ 0.31
CHFR-222ENST00000544093 C7orf66A4D0T2 115 aa17■□□□□ 0.31
CHFR-222ENST00000544093 CXorf65A6NEN9 183 aa17■□□□□ 0.31
CHFR-222ENST00000544093 NUPR2A6NF83 97 aa17■□□□□ 0.31
CHFR-222ENST00000544093 ISLRO14498 428 aa17■□□□□ 0.31
CHFR-222ENST00000544093 CCSO14618 274 aa17■□□□□ 0.31
CHFR-222ENST00000544093 ORM2P19652 201 aa17■□□□□ 0.31
CHFR-222ENST00000544093 C2orf50Q96LR7 162 aa17■□□□□ 0.31
CHFR-222ENST00000544093 C1QTNF4Q9BXJ3 329 aa17■□□□□ 0.31
CHFR-222ENST00000544093 BATF3Q9NR55 127 aa17■□□□□ 0.31
CHFR-222ENST00000544093 RNF24Q9Y225 148 aa17■□□□□ 0.31
CHFR-222ENST00000544093 DYNC2H1Q8NCM8 4307 aaKnown RBP17■□□□□ 0.31
CHFR-222ENST00000544093 ZNF98A6NK75 572 aa16.99■□□□□ 0.31
CHFR-222ENST00000544093 K7EPK0 472 aa16.99■□□□□ 0.31
CHFR-222ENST00000544093 PVALBP20472 110 aaPredicted RBP16.99■□□□□ 0.31
CHFR-222ENST00000544093 TEPPQ6URK8 271 aa16.99■□□□□ 0.31
CHFR-222ENST00000544093 OR1B1Q8NGR6 318 aa16.99■□□□□ 0.31
CHFR-222ENST00000544093 HLA-DRB4P13762 266 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 GATA2P23769 480 aaPredicted RBP16.98■□□□□ 0.31
CHFR-222ENST00000544093 PLP1P60201 277 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 RAP2BP61225 183 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 RRAS2P62070 204 aaPredicted RBP16.98■□□□□ 0.31
CHFR-222ENST00000544093 SPATA31B1PQ5VZV4 182 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 GSG1LQ6UXU4 331 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 SLC25A22Q9H936 323 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 GPN1Q9HCN4 374 aaPredicted RBP16.98■□□□□ 0.31
CHFR-222ENST00000544093 HLA-DRB4X5D2U9 266 aa16.98■□□□□ 0.31
CHFR-222ENST00000544093 H3BMM0 161 aa16.97■□□□□ 0.31
CHFR-222ENST00000544093 SOCS3O14543 225 aa16.97■□□□□ 0.31
CHFR-222ENST00000544093 HYPMO75409 117 aa16.97■□□□□ 0.31
CHFR-222ENST00000544093 GIG44P09565 113 aaPredicted RBP16.97■□□□□ 0.31
CHFR-222ENST00000544093 PXDC1Q5TGL8 231 aa16.97■□□□□ 0.31
CHFR-222ENST00000544093 TMEM182Q6ZP80 229 aaPredicted RBP16.97■□□□□ 0.31
CHFR-222ENST00000544093 MFFQ9GZY8 342 aa16.97■□□□□ 0.31
CHFR-222ENST00000544093 DEDDO75618 318 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 CCNKO75909 580 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 LINC00869P0C866 280 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 C4BPBP20851 252 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 FOXI2Q6ZQN5 318 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 ZNF546Q86UE3 836 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 LINC00052Q96N35 136 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 SLC25A32Q9H2D1 315 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 HIGD1AQ9Y241 93 aa16.96■□□□□ 0.31
CHFR-222ENST00000544093 LSM5Q9Y4Y9 91 aaKnown RBP16.96■□□□□ 0.31
CHFR-222ENST00000544093 MIFP14174 115 aa16.95■□□□□ 0.3
CHFR-222ENST00000544093 BCAP31P51572 246 aa16.95■□□□□ 0.3
CHFR-222ENST00000544093 EWSR1Q01844 656 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHFR-222ENST00000544093 PMS2P11Q13670 270 aa16.95■□□□□ 0.3
CHFR-222ENST00000544093 CLUHP3Q96NS8 147 aa16.95■□□□□ 0.3
CHFR-222ENST00000544093 SLC25A39Q9BZJ4 359 aaPredicted RBP16.95■□□□□ 0.3
CHFR-222ENST00000544093 SAV1Q9H4B6 383 aaPredicted RBP16.95■□□□□ 0.3
CHFR-222ENST00000544093 RPL7P18124 248 aaKnown RBP16.94■□□□□ 0.3
CHFR-222ENST00000544093 CAV2P51636 162 aa16.94■□□□□ 0.3
CHFR-222ENST00000544093 C16orf92Q96LL3 132 aa16.94■□□□□ 0.3
CHFR-222ENST00000544093 SHANK2-AS3Q9BTD1 123 aa16.94■□□□□ 0.3
CHFR-222ENST00000544093 KLK5Q9Y337 293 aaPredicted RBP16.94■□□□□ 0.3
CHFR-222ENST00000544093 ZNF705EA8MWA4 302 aaPredicted RBP16.93■□□□□ 0.3
CHFR-222ENST00000544093 H3BRN7 92 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 GOSR2O14653 212 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 PRAF2O60831 178 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 OR5G3P0C626 314 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 DEFA1P59665 94 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 DEFA3P59666 94 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 RAB31Q13636 194 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 CEMP1Q6PRD7 247 aaPredicted RBP16.93■□□□□ 0.3
CHFR-222ENST00000544093 C11orf45Q8TAV5 145 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 LYSTQ99698 3801 aa16.93■□□□□ 0.3
CHFR-222ENST00000544093 RSG1Q9BU20 258 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 320.7 ms