RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 CNIH1O95406 144 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 TPPP2P59282 170 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 LY6DQ14210 128 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 BATFQ16520 125 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 TDRG1Q3Y452 100 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 Q6ZWC4 215 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 NPBQ8NG41 125 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 FAM168AQ92567 244 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 PGPA6NDG6 321 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 CEACAM3P40198 252 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 TCL1AP56279 114 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 COL5A1-AS1Q5SY13 56 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 SERTAD4Q9NUC0 356 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 ZFP30Q9Y2G7 519 aa12.76□□□□□ -0.37
SCNN1A-221ENST00000543768 K7EIM0 57 aa12.75□□□□□ -0.37
SCNN1A-221ENST00000543768 CA1P00915 261 aaPredicted RBP12.75□□□□□ -0.37
SCNN1A-221ENST00000543768 LINC00310P59036 64 aa12.75□□□□□ -0.37
SCNN1A-221ENST00000543768 SLC35B1P78383 322 aa12.75□□□□□ -0.37
SCNN1A-221ENST00000543768 FAM231DQ6ZW35 169 aa12.75□□□□□ -0.37
SCNN1A-221ENST00000543768 A0A1W2PRD5 423 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 A0A1W2PRF3 423 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 A0A1W2PRM7 423 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 IGKV1-17P01599 117 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 CD33P20138 364 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 MBD6Q96DN6 1003 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 VAMP8Q9BV40 100 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 C7orf69Q9H7B7 122 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 HIGD1AQ9Y241 93 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 PAM16Q9Y3D7 125 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 KLF12Q9Y4X4 402 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 HIVEP3Q5T1R4 2406 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 TCF21O43680 179 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 CRISP2P16562 243 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 TMEM136Q6ZRR5 245 aa12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 FAM103A1Q9BTL3 118 aaKnown RBP12.74□□□□□ -0.37
SCNN1A-221ENST00000543768 LYZP61626 148 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 NUDT10Q8NFP7 164 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 NUDT11Q96G61 164 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 NDUFS7O75251 213 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 ESDP10768 282 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 ZFP36P26651 326 aaKnown RBP12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 RPL19P84098 196 aaKnown RBP12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 DYNAPQ8N1N2 210 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
SCNN1A-221ENST00000543768 H3BTX0 84 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 MT-ND6P03923 174 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 CDKN1AP38936 164 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 TFPI2P48307 235 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 C5orf64Q2M2E5 130 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 MRPL27Q9P0M9 148 aaKnown RBP12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 IZUMO1RA6ND01 250 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 UBE2G1P62253 170 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 Q0VG73 95 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 HES1Q14469 280 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 COX19Q49B96 90 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 VMO1Q7Z5L0 202 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 HSPB9Q9BQS6 159 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 Q9H3A6 140 aa12.72□□□□□ -0.37
SCNN1A-221ENST00000543768 F2Z2F3 143 aa12.71□□□□□ -0.37
SCNN1A-221ENST00000543768 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.37
SCNN1A-221ENST00000543768 VN1R17PQ8TDU5 208 aa12.71□□□□□ -0.37
SCNN1A-221ENST00000543768 MLST8Q9BVC4 326 aa12.71□□□□□ -0.37
SCNN1A-221ENST00000543768 SERF1AO75920 110 aa12.71□□□□□ -0.38
SCNN1A-221ENST00000543768 AMY1AP04745 511 aa12.71□□□□□ -0.38
SCNN1A-221ENST00000543768 PRR27Q6MZM9 219 aa12.71□□□□□ -0.38
SCNN1A-221ENST00000543768 TMEM14CQ9P0S9 112 aa12.71□□□□□ -0.38
SCNN1A-221ENST00000543768 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.38
SCNN1A-221ENST00000543768 CSMD1Q96PZ7 3565 aa12.71□□□□□ -0.38
SCNN1A-221ENST00000543768 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 KIR3DL3Q8N743 410 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 GRAMD2BQ96HH9 432 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 GPR82Q96P67 336 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 PRORYQ9H606 182 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 ZNF586Q9NXT0 402 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 TCRAP04437 139 aa12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 HOXB4P17483 251 aaPredicted RBP12.7□□□□□ -0.38
SCNN1A-221ENST00000543768 TOMM40O96008 361 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 KIAA1644Q3SXP7 199 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 Q8N6K4 173 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 OR4B1Q8NGF8 309 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 FANCD2OSQ96PS1 177 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 GNB4Q9HAV0 340 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 HLA-DQA1P01909 254 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 COTL1Q14019 142 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 CCDC144NLQ6NUI1 221 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 ZNF562Q6V9R5 426 aa12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 LINC00322Q6ZN03 302 aaPredicted RBP12.69□□□□□ -0.38
SCNN1A-221ENST00000543768 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms