RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 COL7A1Q02388 2944 aa13.33□□□□□ -0.28
TSFM-208ENST00000543727 IGSF23A1L1A6 192 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 MPDU1O75352 247 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 MPC2O95563 127 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 SAMD13Q5VXD3 122 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 TMEM217Q8N7C4 229 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 PPP1R14BQ96C90 147 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 GPR82Q96P67 336 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 ZMAT4Q9H898 229 aa13.32□□□□□ -0.28
TSFM-208ENST00000543727 K7EQG2 157 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 LINC00869P0C866 280 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 RAP2BP61225 183 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 STXBP6Q8NFX7 210 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 DCANP1Q8TF63 244 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 CHAC2Q8WUX2 184 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 TM2D3Q9BRN9 247 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 WFDC10AQ9H1F0 79 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 NRN1Q9NPD7 142 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 OR5AC2Q9NZP5 309 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
TSFM-208ENST00000543727 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
TSFM-208ENST00000543727 AGPAT2O15120 278 aa13.3□□□□□ -0.28
TSFM-208ENST00000543727 HYPMO75409 117 aa13.3□□□□□ -0.28
TSFM-208ENST00000543727 TFPI2P48307 235 aa13.3□□□□□ -0.28
TSFM-208ENST00000543727 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSFM-208ENST00000543727 GBGT1Q8N5D6 347 aa13.3□□□□□ -0.28
TSFM-208ENST00000543727 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
TSFM-208ENST00000543727 LOC102724200A0A096LPH7 203 aaPredicted RBP13.29□□□□□ -0.28
TSFM-208ENST00000543727 RBMY1BA6NDE4 496 aaKnown RBP13.29□□□□□ -0.28
TSFM-208ENST00000543727 RBMY1EA6NEQ0 496 aaKnown RBP13.29□□□□□ -0.28
TSFM-208ENST00000543727 H0YIZ8 118 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 RBMY1DP0C7P1 496 aaKnown RBP13.29□□□□□ -0.28
TSFM-208ENST00000543727 ORM2P19652 201 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 FGL1Q08830 312 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 HAGHQ16775 308 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 OR8I2Q8N0Y5 310 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 STPG3Q8N7X2 389 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 OR1B1Q8NGR6 318 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 MGST2Q99735 147 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 SPATA25Q9BR10 227 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 UBQLN2Q9UHD9 624 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 HIGD1AQ9Y241 93 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 U3KQK5 164 aa13.29□□□□□ -0.28
TSFM-208ENST00000543727 ELOA3CA0A087WX78 387 aaPredicted RBP13.28□□□□□ -0.28
TSFM-208ENST00000543727 KIR2DL5BA0A0G2JN68 375 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 KIR2DL5BA0A0G2JPC4 375 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 ZNF98A6NK75 572 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 LYL1P12980 280 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 CXCL3P19876 107 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 GATA2P23769 480 aaPredicted RBP13.28□□□□□ -0.28
TSFM-208ENST00000543727 GALR1P47211 349 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 CAMLGP49069 296 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 MEOX2P50222 304 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 APOC4P55056 127 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 SNRPD3P62318 126 aaKnown RBP13.28□□□□□ -0.28
TSFM-208ENST00000543727 TMEM182Q6ZP80 229 aaPredicted RBP13.28□□□□□ -0.28
TSFM-208ENST00000543727 KIR2DL5AQ8N109 375 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 OR11H7Q8NGC8 314 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 ASCL2Q99929 193 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 RNF126Q9BV68 326 aa13.28□□□□□ -0.28
TSFM-208ENST00000543727 UBE2L5PA0A1B0GUS4 154 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 H3BRN7 92 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 GIPP09681 153 aaPredicted RBP13.27□□□□□ -0.29
TSFM-208ENST00000543727 FCN2Q15485 313 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 WFDC3Q8IUB2 231 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 OR5C1Q8NGR4 320 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 THAP6Q8TBB0 222 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 SHANK2-AS3Q9BTD1 123 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 SLC25A39Q9BZJ4 359 aaPredicted RBP13.27□□□□□ -0.29
TSFM-208ENST00000543727 KCNIP2Q9NS61 270 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 MBD2Q9UBB5 411 aa13.27□□□□□ -0.29
TSFM-208ENST00000543727 UBE2CO00762 179 aa13.26□□□□□ -0.29
TSFM-208ENST00000543727 RPL7P18124 248 aaKnown RBP13.26□□□□□ -0.29
TSFM-208ENST00000543727 RPL29P47914 159 aaKnown RBP13.26□□□□□ -0.29
TSFM-208ENST00000543727 NHLH2Q02577 135 aa13.26□□□□□ -0.29
TSFM-208ENST00000543727 Q6ZRG5 221 aa13.26□□□□□ -0.29
TSFM-208ENST00000543727 CITED4Q96RK1 184 aa13.26□□□□□ -0.29
TSFM-208ENST00000543727 ARL6Q9H0F7 186 aa13.26□□□□□ -0.29
TSFM-208ENST00000543727 OR5G3P0C626 314 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 RPL12P30050 165 aaKnown RBP13.25□□□□□ -0.29
TSFM-208ENST00000543727 PRR20EP86478 221 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 PRR20CP86479 221 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 PRR20DP86480 221 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 PRR20BP86481 221 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 PRR20AP86496 221 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 OPCMLQ14982 345 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 PFDN5Q99471 154 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 HSPB11Q9Y547 144 aa13.25□□□□□ -0.29
TSFM-208ENST00000543727 FGF7P21781 194 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 ID1P41134 155 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 PSMB3P49720 205 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 DEFB131AP59861 70 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 APRG1Q8IVJ8 170 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 RCHY1Q96PM5 261 aa13.24□□□□□ -0.29
TSFM-208ENST00000543727 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms