RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 Q6ZN92 141 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 LHFPL3Q86UP9 236 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF114Q8NC26 417 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 OR5AP2Q8NGF4 316 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 SMIM19Q96E16 107 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 C9orf85Q96MD7 179 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 S100A13Q99584 98 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF436Q9C0F3 470 aaPredicted RBP3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 ARL6Q9H0F7 186 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 ACOT13Q9NPJ3 140 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 THYN1Q9P016 225 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 KLK9Q9UKQ9 250 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 UFC1Q9Y3C8 167 aa3.43□□□□□ -1.86
NPIPB4-219ENST00000543660 A0A0B4J2A0 478 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 LOC105371267A0A1B0GV96 52 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 TMEM212A6NML5 194 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF705EA8MWA4 302 aaPredicted RBP3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 J3QLW9 94 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 GNGT2O14610 69 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 CTSDP07339 412 aaPredicted RBP3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 LIMS3P0CW19 117 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 LIMS4P0CW20 117 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF19P17023 458 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 HRH1P35367 487 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 CEACAM6P40199 344 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 BRWD1-AS2P59051 145 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 MLLT11Q13015 90 aaPredicted RBP3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 FHL2Q14192 279 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 C10orf55Q5SWW7 151 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 LAMTOR1Q6IAA8 161 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF880Q6PDB4 577 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF66Q6ZN08 573 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 IDO2Q6ZQW0 420 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 SLC25A42Q86VD7 318 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 DHFR2Q86XF0 187 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 DEFB107AQ8IZN7 70 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 SECTM1Q8WVN6 248 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 TMED6Q8WW62 240 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 DNAJC9Q8WXX5 260 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 FRZBQ92765 325 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 PTX4Q96A99 478 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 DGCR14Q96DF8 476 aaKnown RBP3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ST6GAL2Q96JF0 529 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 SPIN2AQ99865 258 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 SPIN2BQ9BPZ2 258 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 BANF2Q9H503 90 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF430Q9H8G1 570 aaPredicted RBP3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 TMEM138Q9NPI0 162 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 COMMD9Q9P000 198 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ABRACLQ9P1F3 81 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 OR1A1Q9P1Q5 309 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 MDFICQ9P1T7 246 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 SHPKQ9UHJ6 478 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 RAB26Q9ULW5 256 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF257Q9Y2Q1 563 aa3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
NPIPB4-219ENST00000543660 TRBV7-1A0A0A6YYK4 115 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 A0A1B0GW64 132 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 DAPL1A0PJW8 107 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 TMEM238C9JI98 176 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 E7EUB6 86 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 E9PLD3 99 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 SMKR1H3BMG3 65 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 M0R1X1 148 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 MRPS14O60783 128 aaKnown RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 PDCD6O75340 191 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 FAM107AO95990 144 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 NAPSAO96009 420 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 PSMA1P25786 263 aaKnown RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 GNRHRP30968 328 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 GTF2A1P52655 376 aaPredicted RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 SUB1P53999 127 aaKnown RBP eCLIP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 PAX9P55771 341 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 TAS2R31P59538 309 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 CD164Q04900 197 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 CLINT1Q14677 625 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 YIF1BQ5BJH7 314 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 OR10J3Q5JRS4 329 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 FFAR4Q5NUL3 377 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 LINC00242Q5T6M2 205 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 MORN3Q6PF18 240 aaPredicted RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 GLIPR1L1Q6UWM5 242 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 PUSL1Q8N0Z8 303 aaKnown RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 OR10G7Q8NGN6 311 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 OR5AK2Q8NH90 309 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 ACOT12Q8WYK0 555 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 TMEM190Q8WZ59 177 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 FAM210BQ96KR6 192 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 ZNF184Q99676 751 aaPredicted RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 SELENOIQ9C0D9 397 aa3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 NXF2Q9GZY0 626 aaKnown RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 DAZ1Q9NQZ3 744 aaKnown RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.41□□□□□ -1.86
NPIPB4-219ENST00000543660 IGLV11-55A0A075B6I3 123 aa3.4□□□□□ -1.87
NPIPB4-219ENST00000543660 A0A1B0GWB2 263 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms