RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 EBLN2Q6P2I7 272 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 NEU1Q99519 415 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 SAV1Q9H4B6 383 aaPredicted RBP9.47□□□□□ -0.89
RTN3-213ENST00000543552 V9GYH0 126 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 DNAH10Q8IVF4 4471 aa9.47□□□□□ -0.89
RTN3-213ENST00000543552 DEFB131BA0A096LNP1 70 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 SYNGR2O43760 224 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 SFT2D2O95562 160 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 INPP1P49441 399 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 OR2F1Q13607 317 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 SPANXN2Q5MJ10 180 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
RTN3-213ENST00000543552 BPIFCQ8NFQ6 507 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 GPR82Q96P67 336 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 RPRMQ9NS64 109 aa9.46□□□□□ -0.9
RTN3-213ENST00000543552 ZNF705FA8MVS1 300 aaPredicted RBP9.45□□□□□ -0.9
RTN3-213ENST00000543552 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 ZNF705DP0CH99 300 aaPredicted RBP9.45□□□□□ -0.9
RTN3-213ENST00000543552 ZNF705BP0CI00 300 aaPredicted RBP9.45□□□□□ -0.9
RTN3-213ENST00000543552 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 PPP1R1AQ13522 171 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 WDR12Q9GZL7 423 aaKnown RBP9.45□□□□□ -0.9
RTN3-213ENST00000543552 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 GOLT1BQ9Y3E0 138 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
RTN3-213ENST00000543552 RFNGQ9Y644 331 aa9.45□□□□□ -0.9
RTN3-213ENST00000543552 WRBO00258 174 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 SOCS3O14543 225 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 HOXB5P09067 269 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 P0DMU3 169 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PAX9P55771 341 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PRR20EP86478 221 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PRR20CP86479 221 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PRR20DP86480 221 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PRR20BP86481 221 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PRR20AP86496 221 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 PSG9Q00887 426 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 ZNF79Q15937 498 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 GDF5OSQ5U4N7 250 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 S100A7AQ86SG5 101 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 TMEM147Q9BVK8 224 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
RTN3-213ENST00000543552 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 IGKV1OR2-108A0A075B7D4 117 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 NAP1L6A6NFF2 107 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 SPANXN5Q5MJ07 72 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 TRIQKQ629K1 86 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 CCDC190Q86UF4 302 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 OR1B1Q8NGR6 318 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 C7orf50Q9BRJ6 194 aaKnown RBP9.43□□□□□ -0.9
RTN3-213ENST00000543552 SLC25A22Q9H936 323 aa9.43□□□□□ -0.9
RTN3-213ENST00000543552 A0A0J9YX75 114 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 ZNF98A6NK75 572 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 IFNA21P01568 189 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 HBE1P02100 147 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 ORM2P19652 201 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 EMP1P54849 157 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 FAM78BQ5VT40 261 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 ACOT7LQ6ZUV0 252 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 ZNF767PQ75MW2 155 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 ZNF709Q8N972 641 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 SLC25A32Q9H2D1 315 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 DOK5Q9P104 306 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 RNF24Q9Y225 148 aa9.42□□□□□ -0.9
RTN3-213ENST00000543552 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 CENPXA8MT69 81 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 PRSS46E5RG02 174 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 H3BP45 60 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 ZNF701M0R085 212 aaPredicted RBP9.41□□□□□ -0.9
RTN3-213ENST00000543552 FXYD7P58549 80 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 RAP2BP61225 183 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 SELENOTP62341 195 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 LINC00336Q6ZUF6 198 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 RSG1Q9BU20 258 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 SLC35B3Q9H1N7 401 aa9.41□□□□□ -0.9
RTN3-213ENST00000543552 C9orf170A2RU37 121 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 NDUFB6O95139 128 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 DUSP14O95147 198 aaKnown RBP9.4□□□□□ -0.9
RTN3-213ENST00000543552 IL5P05113 134 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 DEFB1P60022 68 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 TMEM144Q7Z5S9 345 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 NIPSNAP3BQ9BS92 247 aa9.4□□□□□ -0.9
RTN3-213ENST00000543552 LOC102723971A0A1B0GUV8 181 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 F6UB75 175 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 SSSCA1O60232 199 aa9.39□□□□□ -0.91
RTN3-213ENST00000543552 RPL7P18124 248 aaKnown RBP9.39□□□□□ -0.91
RTN3-213ENST00000543552 ID3Q02535 119 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms