RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 IZUMO1RA6ND01 250 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 HELTA6NFD8 242 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 OR4C46A6NHA9 309 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 WIPF1O43516 503 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 CD5P06127 495 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 CRYBB3P26998 211 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 CD81P60033 236 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 B2MP61769 119 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 EGFEM1PQ0D2K5 195 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 ZNF266Q14584 549 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 VWC2Q2TAL6 325 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 PXDC1Q5TGL8 231 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 MIC13Q5XKP0 118 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 TMEM182Q6ZP80 229 aaPredicted RBP4.77□□□□□ -1.65
LTBR-212ENST00000543542 AKAP14Q86UN6 197 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 OR8I2Q8N0Y5 310 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 STXBP6Q8NFX7 210 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 OR1L4Q8NGR5 311 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 MRAPQ8TCY5 172 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 PFDN5Q99471 154 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 GGTLC1Q9BX51 225 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 NPCDR1Q9BY65 106 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 MFFQ9GZY8 342 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 KCNIP2Q9NS61 270 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
LTBR-212ENST00000543542 FBXL17Q9UF56 701 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 RNF24Q9Y225 148 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 PXMP4Q9Y6I8 212 aa4.77□□□□□ -1.65
LTBR-212ENST00000543542 ELOA3CA0A087WX78 387 aaPredicted RBP4.76□□□□□ -1.65
LTBR-212ENST00000543542 TSPAN4O14817 238 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 PFDN1O60925 122 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 ATF4P18848 351 aaPredicted RBP4.76□□□□□ -1.65
LTBR-212ENST00000543542 GALR1P47211 349 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 OPCMLQ14982 345 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 KPRPQ5T749 579 aaPredicted RBP4.76□□□□□ -1.65
LTBR-212ENST00000543542 C10orf113Q5VZT2 155 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 SIGLEC15Q6ZMC9 328 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 STPG3Q8N7X2 389 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 ZNF414Q96IQ9 312 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 AQP10Q96PS8 301 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 SPAG8Q99932 426 aaPredicted RBP4.76□□□□□ -1.65
LTBR-212ENST00000543542 NEURL2Q9BR09 285 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 WDR61Q9GZS3 305 aaKnown RBP4.76□□□□□ -1.65
LTBR-212ENST00000543542 ARV1Q9H2C2 271 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 VSIRQ9H7M9 311 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 TUBA4BQ9H853 241 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 SLC39A9Q9NUM3 307 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 UBQLN2Q9UHD9 624 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 SLC45A2Q9UMX9 530 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 TNFSF18Q9UNG2 199 aa4.76□□□□□ -1.65
LTBR-212ENST00000543542 LSM4Q9Y4Z0 139 aaKnown RBP4.76□□□□□ -1.65
LTBR-212ENST00000543542 KANTRA0A1W2PQU2 76 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 ZNF98A6NK75 572 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 ZNF785A8K8V0 405 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 BUB3O43684 328 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 RPL29P47914 159 aaKnown RBP4.75□□□□□ -1.65
LTBR-212ENST00000543542 CMC4P56277 68 aaPredicted RBP4.75□□□□□ -1.65
LTBR-212ENST00000543542 PLP1P60201 277 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 FFAR4Q5NUL3 377 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 C1orf194Q5T5A4 169 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 LEMD1Q68G75 181 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 LINC00305Q7Z4B0 112 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 HSD17B11Q8NBQ5 300 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 LRRC20Q8TCA0 184 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 GPR82Q96P67 336 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 UHRF2Q96PU4 802 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 RSG1Q9BU20 258 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 SCRT1Q9BWW7 348 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 SLC25A39Q9BZJ4 359 aaPredicted RBP4.75□□□□□ -1.65
LTBR-212ENST00000543542 MS4A6AQ9H2W1 248 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 WFDC1Q9HC57 220 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 DNAJC4Q9NNZ3 241 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 SMAD5-AS1Q9Y6J3 95 aa4.75□□□□□ -1.65
LTBR-212ENST00000543542 A0A0D9SG52 128 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 A0A1B0GVG6 124 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 RNF222A6NCQ9 220 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 HMSDA8MTL9 139 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 OR11H12B2RN74 326 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 H3BRN7 92 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 K7EIL1 84 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 TAAR5O14804 337 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 CD7P09564 240 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 RPL7P18124 248 aaKnown RBP4.74□□□□□ -1.65
LTBR-212ENST00000543542 ID1P41134 155 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 SNRPD3P62318 126 aaKnown RBP4.74□□□□□ -1.65
LTBR-212ENST00000543542 PRR20EP86478 221 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 PRR20CP86479 221 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 PRR20DP86480 221 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 PRR20BP86481 221 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 PRR20AP86496 221 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 ACOT6Q3I5F7 207 aaPredicted RBP4.74□□□□□ -1.65
LTBR-212ENST00000543542 FAM78BQ5VT40 261 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 FAM90A2PQ658T7 463 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 PATE2Q6UY27 113 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 BPIFA4PQ86YQ2 179 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 GATAD1Q8WUU5 269 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 GLMPQ8WWB7 406 aa4.74□□□□□ -1.65
LTBR-212ENST00000543542 ST6GAL2Q96JF0 529 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms