RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PAXXQ9BUH6 204 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 NUPL2O15504 423 aaKnown RBP19.03■□□□□ 0.64
TTC3-225ENST00000540756 IGLV1-40P01703 118 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 CLRN3Q8NCR9 226 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 Q8WTZ3 238 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 FXYD5Q96DB9 178 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 OR51M1Q9H341 326 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 ZNF702PQ9H963 129 aa19.03■□□□□ 0.64
TTC3-225ENST00000540756 PPP5D1E7EU14 171 aa19.02■□□□□ 0.64
TTC3-225ENST00000540756 BTN1A1Q13410 526 aa19.02■□□□□ 0.64
TTC3-225ENST00000540756 SUN5Q8TC36 379 aa19.02■□□□□ 0.64
TTC3-225ENST00000540756 RPUSD4Q96CM3 377 aaKnown RBP19.02■□□□□ 0.64
TTC3-225ENST00000540756 GNB4Q9HAV0 340 aa19.02■□□□□ 0.64
TTC3-225ENST00000540756 TMEM167BQ9NRX6 74 aa19.02■□□□□ 0.64
TTC3-225ENST00000540756 H3BQ15 152 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 OR2C1O95371 312 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 TAGLN2P37802 199 aaKnown RBP19.01■□□□□ 0.63
TTC3-225ENST00000540756 AKR1C3P42330 323 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 ZNF674Q2M3X9 581 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 FAM223BA6NKX1 122 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 TRBV12-3P01733 135 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 IGHV3-11P01762 117 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 FAM223AQ8IWN6 122 aa19.01■□□□□ 0.63
TTC3-225ENST00000540756 TRBV7-1A0A0A6YYK4 115 aa19■□□□□ 0.63
TTC3-225ENST00000540756 H3BTX0 84 aa19■□□□□ 0.63
TTC3-225ENST00000540756 SNAPINO95295 136 aa19■□□□□ 0.63
TTC3-225ENST00000540756 DERL1Q9BUN8 251 aa19■□□□□ 0.63
TTC3-225ENST00000540756 PRSS22Q9GZN4 317 aa19■□□□□ 0.63
TTC3-225ENST00000540756 SCO2A0A1W2PP80 73 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 GGTLC3B5MD39 225 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 M0R036 132 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 GP9P14770 177 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 AWAT1Q58HT5 328 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 TEX29Q8N6K0 151 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 NPFFR1Q9GZQ6 430 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 PARLQ9H300 379 aa18.99■□□□□ 0.63
TTC3-225ENST00000540756 TMEM250H0YL14 139 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 TGOLN2O43493 480 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 RAB9AP51151 201 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 FAM74A3Q4VXF1 159 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 BLNKQ8WV28 456 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 SHANK2-AS3Q9BTD1 123 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 ESM1Q9NQ30 184 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 H3BRN7 92 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 TMEM88Q6PEY1 159 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 TOMM20LQ6UXN7 152 aa18.98■□□□□ 0.63
TTC3-225ENST00000540756 HIVEP2P31629 2446 aa18.97■□□□□ 0.63
TTC3-225ENST00000540756 ZNF727A8MUV8 499 aa18.97■□□□□ 0.63
TTC3-225ENST00000540756 H3BUA1 57 aa18.97■□□□□ 0.63
TTC3-225ENST00000540756 NDUFB4O95168 129 aa18.97■□□□□ 0.63
TTC3-225ENST00000540756 BRI3O95415 125 aa18.97■□□□□ 0.63
TTC3-225ENST00000540756 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.97■□□□□ 0.63
TTC3-225ENST00000540756 DNAJC9-AS1A6NH13 148 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 ZNF600Q6ZNG1 722 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 SMIM7Q9BQ49 75 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 NIPSNAP3BQ9BS92 247 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 ZFAND3Q9H8U3 227 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 ZNF580Q9UK33 172 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 PDE6DO43924 150 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 ZNF343Q6P1L6 599 aa18.96■□□□□ 0.63
TTC3-225ENST00000540756 LY6G6DO95868 133 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 IGHG4P01861 327 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 PSMB8P28062 276 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 SUMO1P63165 101 aaKnown RBP18.95■□□□□ 0.62
TTC3-225ENST00000540756 CBLN2Q8IUK8 224 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 HIVEP1P15822 2718 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 ZNF98A6NK75 572 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 USMG5Q96IX5 58 aa18.95■□□□□ 0.62
TTC3-225ENST00000540756 C7orf77A4D0Y5 90 aa18.94■□□□□ 0.62
TTC3-225ENST00000540756 DNASE2O00115 360 aaPredicted RBP18.94■□□□□ 0.62
TTC3-225ENST00000540756 SCGB2A1O75556 95 aa18.94■□□□□ 0.62
TTC3-225ENST00000540756 NBEAP1P0C6P0 100 aa18.94■□□□□ 0.62
TTC3-225ENST00000540756 RANP62826 216 aaKnown RBP18.94■□□□□ 0.62
TTC3-225ENST00000540756 Q71RC1 249 aaPredicted RBP18.94■□□□□ 0.62
TTC3-225ENST00000540756 STXBP6Q8NFX7 210 aa18.94■□□□□ 0.62
TTC3-225ENST00000540756 OR5B12Q96R08 314 aa18.94■□□□□ 0.62
TTC3-225ENST00000540756 GAR1Q9NY12 217 aaKnown RBP18.94■□□□□ 0.62
TTC3-225ENST00000540756 FAM181BA6NEQ2 426 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 C17orf77Q96MU5 243 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 ELOVL1Q9BW60 279 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 RPS10P5Q9NQ39 176 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 ZNF586Q9NXT0 402 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 A0A1W2PRE2 83 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 CRYBB3P26998 211 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 ARL3P36405 182 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 RPL15P61313 204 aaKnown RBP18.93■□□□□ 0.62
TTC3-225ENST00000540756 OR4X2Q8NGF9 303 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 TVP23CQ96ET8 276 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 TXNDC17Q9BRA2 123 aa18.93■□□□□ 0.62
TTC3-225ENST00000540756 CLPSL1A2RUU4 121 aa18.92■□□□□ 0.62
TTC3-225ENST00000540756 F6UZH7 168 aa18.92■□□□□ 0.62
TTC3-225ENST00000540756 ZNF207O43670 478 aaKnown RBP18.92■□□□□ 0.62
TTC3-225ENST00000540756 HNF1AP20823 631 aa18.92■□□□□ 0.62
TTC3-225ENST00000540756 SDF2L1Q9HCN8 221 aa18.92■□□□□ 0.62
TTC3-225ENST00000540756 ARL2-SNX15V9GYD0 113 aa18.92■□□□□ 0.62
TTC3-225ENST00000540756 TMEM86BQ8N661 226 aa18.91■□□□□ 0.62
TTC3-225ENST00000540756 SERTAD4Q9NUC0 356 aa18.91■□□□□ 0.62
TTC3-225ENST00000540756 RABAC1Q9UI14 185 aa18.91■□□□□ 0.62
TTC3-225ENST00000540756 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.91■□□□□ 0.62
TTC3-225ENST00000540756 PGPEP1LA6NFU8 196 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms