RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TRBV25-1A0A075B6N4 114 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 TRAV24A0A0B4J272 114 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 LY6G6EA0A0G2JKS1 128 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 C15orf62A8K5M9 175 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 C9JAW5 83 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 FAM106CPP0CH98 169 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 GATA4P43694 442 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 ZNF137PP52743 207 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 FAM106AQ4KMX7 169 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 SSMEM1Q8WWF3 244 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 HIGD1AQ9Y241 93 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 U3KQA8 63 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 PCNX2A6NKB5 2137 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 A0A096LNJ9 63 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 MPDU1O75352 247 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 APOHP02749 345 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-214ENST00000540539 GUSBP11Q6P575 273 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 Q6ZSR3 168 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 DLX4Q92988 240 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-214ENST00000540539 PRTFDC1Q9NRG1 225 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 STARD5Q9NSY2 213 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 C21orf62Q9NYP8 219 aa7.65□□□□□ -1.19
CLIP1-214ENST00000540539 J3KT08 172 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 HSPB6O14558 160 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 PPP1CAP62136 330 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 SPRNQ5BIV9 151 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 FOXL2NBQ6ZUU3 175 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 LRRC75A-AS1Q8N1F1 130 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 ZNF808Q8N4W9 903 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-214ENST00000540539 FLVCR1-AS1Q8TAF5 88 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 BORCS8Q96FH0 119 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 TMEM101Q96IK0 257 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 IGHV1OR21-1A0A087WYE8 117 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 NPIPB13A6NJU9 1138 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 NPIPB4C9JG80 1138 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 TNFSF11O14788 317 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 CD59P13987 128 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 PIGCQ92535 297 aa7.64□□□□□ -1.19
CLIP1-214ENST00000540539 C15orf65H3BRN8 121 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 TNFRSF6BO95407 300 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 MORN3Q6PF18 240 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-214ENST00000540539 MIR17HGQ75NE6 70 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 OR10J6PQ8NGY7 276 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 OR9G1Q8NH87 305 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 KIR2DL5BQ8NHK3 375 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 USF3Q68DE3 2245 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 CNOT1A5YKK6 2376 aaKnown RBP7.63□□□□□ -1.19
CLIP1-214ENST00000540539 DMXL1Q9Y485 3027 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 TMSB15BA0A087X1C1 80 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 H0YGG7 62 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 NPFFO15130 113 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 ZIC3O60481 467 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 P0C879 139 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 ZNF414Q96IQ9 312 aa7.63□□□□□ -1.19
CLIP1-214ENST00000540539 COL5A1P20908 1838 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-214ENST00000540539 PTPRBP23467 1997 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 A0A1W2PPI3 338 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 CLPSP04118 112 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 ACP1P24666 158 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 KIR2DS2P43631 304 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 GFERP55789 205 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 LOXL1Q08397 574 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-214ENST00000540539 LY6DQ14210 128 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 RSPO1Q2MKA7 263 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-214ENST00000540539 OR13C6PQ8NH95 151 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 CEP250Q9BV73 2442 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 ASIPP42127 132 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 CFHR1Q03591 330 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 ASCL5Q7RTU5 278 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-214ENST00000540539 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 FGFBP3Q8TAT2 258 aa7.62□□□□□ -1.19
CLIP1-214ENST00000540539 TNFSF14O43557 240 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 NDUFS7O75251 213 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 ACTL6BO94805 426 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 SP1P08047 785 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 SLC25A53Q5H9E4 307 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 Q6P435 159 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 C20orf204Q6ZNR8 217 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 PLXDC1Q8IUK5 500 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 RPRMLQ8N4K4 120 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 OR1L4Q8NGR5 311 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 C1orf159Q96HA4 380 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 FAM234AQ9H0X4 552 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 TMEM167BQ9NRX6 74 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 DKK2Q9UBU2 259 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 KNTC1P50748 2209 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 TNFRSF1AP19438 455 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 PSMB2P49721 201 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 SRYQ05066 204 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 RBPMS2Q6ZRY4 209 aaKnown RBP7.61□□□□□ -1.19
CLIP1-214ENST00000540539 OR13A1Q8NGR1 328 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 PIFOQ8TCI5 191 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 ZNF503Q96F45 646 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 PGLYRP4Q96LB8 373 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 SGK494Q96LW2 274 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 PRADC1Q9BSG0 188 aa7.61□□□□□ -1.19
CLIP1-214ENST00000540539 IGHV5-51A0A0C4DH38 117 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms