RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PRR20BP86481 221 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 PRR20AP86496 221 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 ZNF90Q03938 601 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 OR2F1Q13607 317 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 LINC00336Q6ZUF6 198 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
UBE3B-211ENST00000539843 RPRMQ9NS64 109 aa11.03□□□□□ -0.64
UBE3B-211ENST00000539843 H3BMQ9 156 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 EMP1P54849 157 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 C12orf74Q32Q52 190 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-211ENST00000539843 BPIFCQ8NFQ6 507 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 C16orf92Q96LL3 132 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 CLUHP3Q96NS8 147 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 GPR82Q96P67 336 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 SLC45A2Q9UMX9 530 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 CELA1Q9UNI1 258 aa11.02□□□□□ -0.65
UBE3B-211ENST00000539843 CCDC160A6NGH7 325 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 HBE1P02100 147 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 INPP1P49441 399 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 PSG9Q00887 426 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF767PQ75MW2 155 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 S100A7AQ86SG5 101 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 UBE2DNLQ8IWF7 75 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 LRTM2Q8N967 370 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 FAM210BQ96KR6 192 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 TMEM208Q9BTX3 173 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 TMEM147Q9BVK8 224 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 KMT2AQ03164 3969 aa11.01□□□□□ -0.65
UBE3B-211ENST00000539843 AGRNO00468 2067 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 IGKV1D-37A0A075B6S9 117 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
UBE3B-211ENST00000539843 WRBO00258 174 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 SYNGR2O43760 224 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 PITX3O75364 302 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 IFNA21P01568 189 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
UBE3B-211ENST00000539843 FXYD7P58549 80 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 THAP8Q8NA92 274 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 WDR12Q9GZL7 423 aaKnown RBP11□□□□□ -0.65
UBE3B-211ENST00000539843 SLC25A22Q9H936 323 aa11□□□□□ -0.65
UBE3B-211ENST00000539843 SFT2D2O95562 160 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 PAX9P55771 341 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 RRN3P1Q2M238 152 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 GDF5OSQ5U4N7 250 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 OR1B1Q8NGR6 318 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 SOSTQ9BQB4 213 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 MAGT1Q9H0U3 335 aa10.99□□□□□ -0.65
UBE3B-211ENST00000539843 STRAPQ9Y3F4 350 aaKnown RBP10.99□□□□□ -0.65
UBE3B-211ENST00000539843 HOXB5P09067 269 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 ORM2P19652 201 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 UBE2MP61081 183 aaKnown RBP10.98□□□□□ -0.65
UBE3B-211ENST00000539843 RAP2BP61225 183 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF79Q15937 498 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 SPANXN5Q5MJ07 72 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 FAM78BQ5VT40 261 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 OR4D5Q8NGN0 318 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 TRIM63Q969Q1 353 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 NIPSNAP3BQ9BS92 247 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 DOK5Q9P104 306 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 RNF24Q9Y225 148 aa10.98□□□□□ -0.65
UBE3B-211ENST00000539843 SMCO3A2RU48 225 aa10.97□□□□□ -0.65
UBE3B-211ENST00000539843 SOCS3O14543 225 aa10.97□□□□□ -0.65
UBE3B-211ENST00000539843 DUSP14O95147 198 aaKnown RBP10.97□□□□□ -0.65
UBE3B-211ENST00000539843 PPP1R1AQ13522 171 aa10.97□□□□□ -0.65
UBE3B-211ENST00000539843 SPANXN2Q5MJ10 180 aa10.97□□□□□ -0.65
UBE3B-211ENST00000539843 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
UBE3B-211ENST00000539843 A0A0J9YX75 114 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 LOC102723971A0A1B0GUV8 181 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF98A6NK75 572 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 B2MP61769 119 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 TRIQKQ629K1 86 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 ZNF709Q8N972 641 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 SLC35B3Q9H1N7 401 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 SLC25A32Q9H2D1 315 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 DKK2Q9UBU2 259 aa10.96□□□□□ -0.65
UBE3B-211ENST00000539843 NAP1L6A6NFF2 107 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 H3BP45 60 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 INSP01308 110 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 IL5P05113 134 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 HTN3P15516 51 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
UBE3B-211ENST00000539843 DEFB1P60022 68 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 DAD1P61803 113 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 FGL1Q08830 312 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 OXA1LQ15070 435 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 SOHLH1Q5JUK2 328 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 ACOT7LQ6ZUV0 252 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 LRRC20Q8TCA0 184 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 V9GYH0 126 aa10.95□□□□□ -0.66
UBE3B-211ENST00000539843 IGKV1OR2-108A0A075B7D4 117 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 CENPXA8MT69 81 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 F6UB75 175 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 SELENOTP62341 195 aa10.94□□□□□ -0.66
UBE3B-211ENST00000539843 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms