RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TECRQ9NZ01 308 aaKnown RBP12.43□□□□□ -0.42
TRAF3-204ENST00000539721 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 A0A1B0GUS0 222 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 I3L521 148 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 NDUFA4O00483 81 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 C8orf88P0DMB2 117 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 TAS2R45P59539 299 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 NDUFA5Q16718 116 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 MORN5Q5VZ52 161 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 C4orf3Q8WVX3 66 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 SLC25A39Q9BZJ4 359 aaPredicted RBP12.43□□□□□ -0.42
TRAF3-204ENST00000539721 RABAC1Q9UI14 185 aa12.43□□□□□ -0.42
TRAF3-204ENST00000539721 TRAV5A0A0B4J249 113 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 NUDT19A8MXV4 375 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 CCL20P78556 96 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 KHDC3LQ587J8 217 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 S100A7AQ86SG5 101 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 IQCF2Q8IXL9 164 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 KLHL30-AS1Q8NEE0 82 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 C20orf24Q9BUV8 137 aa12.42□□□□□ -0.42
TRAF3-204ENST00000539721 TEP1Q99973 2627 aaKnown RBP12.42□□□□□ -0.42
TRAF3-204ENST00000539721 IGHV4OR15-8A0A075B7B6 117 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 A0A087WW49 117 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 CXorf1O96002 111 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 HSPB1P04792 205 aaKnown RBP12.41□□□□□ -0.42
TRAF3-204ENST00000539721 ARL14EPLP0DKL9 152 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 RPEL1Q2QD12 228 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 WFDC12Q8WWY7 111 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 SCRT1Q9BWW7 348 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 MED9Q9NWA0 146 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 C2CD3Q4AC94 2353 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 H3BRN7 92 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 OR7C2O60412 319 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 IL34Q6ZMJ4 242 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 CITED2Q99967 270 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-204ENST00000539721 SHANK2-AS3Q9BTD1 123 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 TMPRSS5Q9H3S3 457 aa12.41□□□□□ -0.42
TRAF3-204ENST00000539721 TSSC4Q9Y5U2 329 aaPredicted RBP12.41□□□□□ -0.42
TRAF3-204ENST00000539721 S100A7P31151 101 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 FOXL1Q12952 345 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 DEFB136Q30KP8 78 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 FAM106AQ4KMX7 169 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 UNQ9165/PRO28630Q6UXU0 137 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 PQLC2Q6ZP29 291 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 SLC7A5P1Q8MH63 180 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 MARC2Q969Z3 335 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 FAM167A-AS1Q96KT0 104 aa12.4□□□□□ -0.42
TRAF3-204ENST00000539721 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
TRAF3-204ENST00000539721 ZNF320A2RRD8 509 aa12.39□□□□□ -0.43
TRAF3-204ENST00000539721 ZNF207O43670 478 aaKnown RBP12.39□□□□□ -0.43
TRAF3-204ENST00000539721 GPHB5Q86YW7 130 aa12.39□□□□□ -0.43
TRAF3-204ENST00000539721 TMEM190Q8WZ59 177 aa12.39□□□□□ -0.43
TRAF3-204ENST00000539721 METTL26Q96S19 204 aa12.39□□□□□ -0.43
TRAF3-204ENST00000539721 ZNF98A6NK75 572 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 LINC01619G3V211 115 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 GCHFRP30047 84 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 C8orf86Q6ZUL3 223 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 OR11H1Q8NG94 326 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 DPF1Q92782 380 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 GNG13Q9P2W3 67 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
TRAF3-204ENST00000539721 NPPCP23582 126 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 HOXD3P31249 432 aaPredicted RBP12.38□□□□□ -0.43
TRAF3-204ENST00000539721 PSMB3P49720 205 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 OR1N2Q8NGR9 330 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 PAXXQ9BUH6 204 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
TRAF3-204ENST00000539721 IFNA1P01562 189 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 OR10J4P0C629 311 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 PYYP10082 97 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 ZP3P21754 424 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 KRTAP10-3P60369 221 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 RNF24Q9Y225 148 aa12.37□□□□□ -0.43
TRAF3-204ENST00000539721 RAB19A4D1S5 217 aa12.36□□□□□ -0.43
TRAF3-204ENST00000539721 CRYBB3P26998 211 aa12.36□□□□□ -0.43
TRAF3-204ENST00000539721 UBE2L3P68036 154 aaKnown RBP12.36□□□□□ -0.43
TRAF3-204ENST00000539721 HAGHQ16775 308 aa12.36□□□□□ -0.43
TRAF3-204ENST00000539721 TOR2AQ5JU69 321 aa12.36□□□□□ -0.43
TRAF3-204ENST00000539721 NARS2Q96I59 477 aaKnown RBP12.36□□□□□ -0.43
TRAF3-204ENST00000539721 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
TRAF3-204ENST00000539721 TMEM167BQ9NRX6 74 aa12.36□□□□□ -0.43
TRAF3-204ENST00000539721 IGHV3-49A0A0A0MS15 119 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 GP9P14770 177 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 PPT1P50897 306 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 SLURP1P55000 103 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 GUK1Q16774 197 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 BPIFA4PQ86YQ2 179 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
TRAF3-204ENST00000539721 MANBALQ9NQG1 85 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 UFC1Q9Y3C8 167 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
TRAF3-204ENST00000539721 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
TRAF3-204ENST00000539721 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms