RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 OR5B12Q96R08 314 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 PBDC1Q9BVG4 233 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 KRTAP4-9Q9BYQ8 210 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 MRPL27Q9P0M9 148 aaKnown RBP8.2□□□□□ -1.1
LEMD3-202ENST00000539442 RNF24Q9Y225 148 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 FUT9Q9Y231 359 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 HIGD1AQ9Y241 93 aa8.2□□□□□ -1.1
LEMD3-202ENST00000539442 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
LEMD3-202ENST00000539442 C2CD3Q4AC94 2353 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 TRAV1-1A0A0B4J248 108 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 HSPB1P04792 205 aaKnown RBP8.19□□□□□ -1.1
LEMD3-202ENST00000539442 CD28P10747 220 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 ZP3P21754 424 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 TAS2R45P59539 299 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 USF2Q15853 346 aaPredicted RBP8.19□□□□□ -1.1
LEMD3-202ENST00000539442 ZNF726P1Q15940 193 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 FAM78BQ5VT40 261 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 GPHB5Q86YW7 130 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 LYPD6BQ8NI32 183 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 RAB24Q969Q5 203 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 SLC25A22Q9H936 323 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 SEPSECSQ9HD40 501 aaKnown RBP8.19□□□□□ -1.1
LEMD3-202ENST00000539442 DOK5Q9P104 306 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 PFDN2Q9UHV9 154 aa8.19□□□□□ -1.1
LEMD3-202ENST00000539442 MAP1LC3B2A6NCE7 125 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 C8orf88P0DMB2 117 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 RPEL1Q2QD12 228 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 FAM106AQ4KMX7 169 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 KHDC3LQ587J8 217 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 LINC00305Q7Z4B0 112 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 SFT2D1Q8WV19 159 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 MAP1LC3BQ9GZQ8 125 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 TECRQ9NZ01 308 aaKnown RBP8.18□□□□□ -1.1
LEMD3-202ENST00000539442 RABAC1Q9UI14 185 aa8.18□□□□□ -1.1
LEMD3-202ENST00000539442 CUBNO60494 3623 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 A0A087WW49 117 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 IGHV3-35A0A0C4DH35 117 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 LINC01619G3V211 115 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 H3BRN7 92 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 CXorf1O96002 111 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 LCN15Q6UWW0 184 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 PQLC2Q6ZP29 291 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 MIR17HGQ75NE6 70 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 REC114Q7Z4M0 266 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 STXBP6Q8NFX7 210 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 PCNPQ8WW12 178 aaKnown RBP8.17□□□□□ -1.1
LEMD3-202ENST00000539442 UHRF2Q96PU4 802 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 METTL26Q96S19 204 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 CITED2Q99967 270 aaPredicted RBP8.17□□□□□ -1.1
LEMD3-202ENST00000539442 SHANK2-AS3Q9BTD1 123 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 SLC25A39Q9BZJ4 359 aaPredicted RBP8.17□□□□□ -1.1
LEMD3-202ENST00000539442 MED9Q9NWA0 146 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 NF1P21359 2839 aa8.17□□□□□ -1.1
LEMD3-202ENST00000539442 TEP1Q99973 2627 aaKnown RBP8.16□□□□□ -1.1
LEMD3-202ENST00000539442 K7EMT4 169 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 LGALS9O00182 355 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 NPPCP23582 126 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 CRYBB3P26998 211 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 HOXD3P31249 432 aaPredicted RBP8.16□□□□□ -1.1
LEMD3-202ENST00000539442 NDUFA5Q16718 116 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 AWAT1Q58HT5 328 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 SPATA31B1PQ5VZV4 182 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 C18orf65Q6ZTR6 163 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 NDUFA11Q86Y39 141 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 C1QL4Q86Z23 238 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 C11orf44Q8N8P7 122 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 OR11H1Q8NG94 326 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 OR1N2Q8NGR9 330 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 DPF1Q92782 380 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 NARS2Q96I59 477 aaKnown RBP8.16□□□□□ -1.1
LEMD3-202ENST00000539442 C20orf24Q9BUV8 137 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 HRH4Q9H3N8 390 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 UFC1Q9Y3C8 167 aa8.16□□□□□ -1.1
LEMD3-202ENST00000539442 LINC00862A6NCI5 91 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 A8MWP6 167 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 HMGB3O15347 200 aaKnown RBP8.15□□□□□ -1.1
LEMD3-202ENST00000539442 ARL14EPLP0DKL9 152 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 PSMB3P49720 205 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 PPT1P50897 306 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 FHL3Q13643 280 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 PMS2P11Q13670 270 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 KRTAP24-1Q3LI83 254 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 C1orf194Q5T5A4 169 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 UNQ9165/PRO28630Q6UXU0 137 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 C8orf86Q6ZUL3 223 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 FAM167A-AS1Q96KT0 104 aa8.15□□□□□ -1.1
LEMD3-202ENST00000539442 GPR82Q96P67 336 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms