RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MBD3L5A6NJ08 208 aaPredicted RBP11.9□□□□□ -0.51
CACNB1-206ENST00000539338 FOXL1Q12952 345 aa11.9□□□□□ -0.51
CACNB1-206ENST00000539338 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.51
CACNB1-206ENST00000539338 MBD3L2Q8NHZ7 208 aaPredicted RBP11.9□□□□□ -0.51
CACNB1-206ENST00000539338 C15orf62A8K5M9 175 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 C9JQL5 133 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 TMEM178BH3BS89 294 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 KLRD1Q13241 179 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 ASCL4Q6XD76 172 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 SPCS1Q9Y6A9 102 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 PI4KAP42356 2102 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 H3BUT2 72 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 IGKV1-6A0A0C4DH72 117 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 HBDP02042 147 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 CD7P09564 240 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 CACNG7P62955 275 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 PRR30Q53SZ7 412 aaPredicted RBP11.89□□□□□ -0.51
CACNB1-206ENST00000539338 KLF17Q5JT82 389 aaPredicted RBP11.89□□□□□ -0.51
CACNB1-206ENST00000539338 PKDREJQ9NTG1 2253 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
CACNB1-206ENST00000539338 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
CACNB1-206ENST00000539338 MST1LQ2TV78 715 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 JKAMPQ9P055 326 aa11.89□□□□□ -0.51
CACNB1-206ENST00000539338 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 TMEM262E9PQX1 116 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 TYMSP04818 313 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 RPL15P61313 204 aaKnown RBP11.88□□□□□ -0.51
CACNB1-206ENST00000539338 CR1LQ2VPA4 569 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 GAFA1Q96PS6 74 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 COL6A6A6NMZ7 2263 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 IGHV1-3A0A0C4DH29 117 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 Q6ZS49 121 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 TNFRSF14Q92956 283 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 ZMAT4Q9H898 229 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
CACNB1-206ENST00000539338 NBASA2RRP1 2371 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 MLANAQ16655 118 aa11.88□□□□□ -0.51
CACNB1-206ENST00000539338 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 H0YJW9 148 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 IGHG3P01860 377 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 CFPP27918 469 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 OR5AN1Q8NGI8 311 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 PAX1P15863 534 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 LINC01587Q99440 93 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 SLC25A39Q9BZJ4 359 aaPredicted RBP11.87□□□□□ -0.51
CACNB1-206ENST00000539338 HEATR5AQ86XA9 2040 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 SFTA2Q6UW10 78 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 SLC25A48Q6ZT89 311 aaKnown RBP11.87□□□□□ -0.51
CACNB1-206ENST00000539338 LINC00469Q8N7U9 141 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 OR13C6PQ8NH95 151 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 PYY3Q5JQD4 70 aa11.87□□□□□ -0.51
CACNB1-206ENST00000539338 SPSB3Q6PJ21 355 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 C1orf147Q96MC9 270 aaPredicted RBP11.86□□□□□ -0.51
CACNB1-206ENST00000539338 SCGB1A1P11684 91 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 WNT2P09544 360 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 ACTL10Q5JWF8 245 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 ABCA4P78363 2273 aa11.86□□□□□ -0.51
CACNB1-206ENST00000539338 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
CACNB1-206ENST00000539338 MSMBP08118 114 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 ATP5L2Q7Z4Y8 100 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 NCR2O95944 276 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 C15orf32Q32M92 178 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 TMEM219Q86XT9 240 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 IGKV1-16P04430 117 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 TCRAP04437 139 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
CACNB1-206ENST00000539338 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
CACNB1-206ENST00000539338 ZNF407Q9C0G0 2248 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 VMO1Q7Z5L0 202 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 CHCHD1Q96BP2 118 aaKnown RBP11.85□□□□□ -0.51
CACNB1-206ENST00000539338 ZNRD1Q9P1U0 126 aa11.85□□□□□ -0.51
CACNB1-206ENST00000539338 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 EMP1P54849 157 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 ZNF474Q6S9Z5 364 aaPredicted RBP11.84□□□□□ -0.51
CACNB1-206ENST00000539338 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 DMRTC2Q8IXT2 367 aaPredicted RBP11.84□□□□□ -0.51
CACNB1-206ENST00000539338 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 PAX8Q06710 450 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
CACNB1-206ENST00000539338 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
CACNB1-206ENST00000539338 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 TNFSF13O75888 250 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNB1-206ENST00000539338 TPTE2P1Q5T6R2 138 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 HELZP42694 1942 aaKnown RBP11.84□□□□□ -0.51
CACNB1-206ENST00000539338 IGKV3D-20A0A0C4DH25 116 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 FXYD7P58549 80 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 TMEM101Q96IK0 257 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 C2orf88Q9BSF0 95 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 LIME1Q9H400 295 aa11.84□□□□□ -0.51
CACNB1-206ENST00000539338 DPM2O94777 84 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms